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  1. Bug Repository
  2. BUG-120

Arrow on wrong end of bed feature - TopHat bed

          Details

          • Type: Bug
          • Status: Closed (View Workflow)
          • Priority: Major
          • Resolution: Fixed
          • Labels:
            None
          • Environment:

            IGB 6.6 r8304

            Description

            When I load "bed" files from TopHat the pointer appears on the wrong block.
            See attached.

              Attachments

                Issue Links

                relates to

                Task - A task that needs to be done. BUG-682 Style elements

                • Blocker - Blocks development and/or testing work, production could not run.
                • Closed

                Task - A task that needs to be done. IGBF-2865 Investigate glyphs representing introns in older versions of IGB

                • Major - Major loss of function.
                • Closed

                  Activity

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                  ann.loraine Ann Loraine created issue -
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                  hiralv Hiral Vora (Inactive) added a comment -

                  Fixed in r8323.

                  Show
                  hiralv Hiral Vora (Inactive) added a comment - Fixed in r8323.
                  hiralv Hiral Vora (Inactive) made changes -
                  Field Original Value New Value
                  Assignee Hiral Vora [ hiralv ] Alyssa Gulledge [ alyssa ]
                  alyssa Alyssa Gulledge (Inactive) made changes -
                  Status Open [ 1 ] Resolved [ 5 ]
                  Resolution Fixed [ 1 ]
                  alyssa Alyssa Gulledge (Inactive) made changes -
                  Status Resolved [ 5 ] Closed [ 6 ]
                  alyssa Alyssa Gulledge (Inactive) made changes -
                  Project IGB6.6 [ 10021 ] Bug Repository [ 10030 ]
                  Key IGBA-103 BUG-120
                  alyssa Alyssa Gulledge (Inactive) made changes -
                  Resolution Fixed [ 1 ]
                  Status Closed [ 6 ] Reopened [ 4 ]
                  david David Norris (Inactive) made changes -
                  Assignee Alyssa Gulledge [ alyssa ]
                  david David Norris (Inactive) made changes -
                  Status Reopened [ 4 ] Resolved [ 5 ]
                  Resolution Fixed [ 1 ]
                  david David Norris (Inactive) made changes -
                  Status Resolved [ 5 ] Closed [ 6 ]
                  alyssa Alyssa Gulledge (Inactive) made changes -
                  Resolution Fixed [ 1 ]
                  Status Closed [ 6 ] Reopened [ 4 ]
                  Assignee Katharine Kubiak [ kkubiak ]
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                  kkubiak Katharine Kubiak (Inactive) added a comment -

                  Passed v9804 Windows

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                  kkubiak Katharine Kubiak (Inactive) added a comment - Passed v9804 Windows
                  kkubiak Katharine Kubiak (Inactive) made changes -
                  Assignee Katharine Kubiak [ kkubiak ] Anuj Puram [ anuj ]
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                  anuj Anuj Puram (Inactive) added a comment -

                  Passed v9906 on Mac

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                  anuj Anuj Puram (Inactive) added a comment - Passed v9906 on Mac
                  anuj Anuj Puram (Inactive) made changes -
                  Assignee Anuj Puram [ anuj ] Alyssa Gulledge [ alyssa ]
                  alyssa Alyssa Gulledge (Inactive) made changes -
                  Status Reopened [ 4 ] Resolved [ 5 ]
                  Assignee Alyssa Gulledge [ alyssa ]
                  Resolution Fixed [ 1 ]
                  alyssa Alyssa Gulledge (Inactive) made changes -
                  Status Resolved [ 5 ] Closed [ 6 ]
                  smylapur Vineeth Mylapur (Inactive) made changes -
                  Resolution Fixed [ 1 ]
                  Status Closed [ 6 ] Reopened [ 4 ]
                  Assignee Vineeth Mylapur [ smylapur ]
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                  smylapur Vineeth Mylapur (Inactive) added a comment -

                  Tested with drought_treatment_2.bed from http://transvar.org/illumina/tophat_2_processed/

                  Passed 7.0 (11941) on windows.

                  Show
                  smylapur Vineeth Mylapur (Inactive) added a comment - Tested with drought_treatment_2.bed from http://transvar.org/illumina/tophat_2_processed/ Passed 7.0 (11941) on windows.
                  smylapur Vineeth Mylapur (Inactive) made changes -
                  Status Reopened [ 4 ] Resolved [ 5 ]
                  Assignee Vineeth Mylapur [ smylapur ]
                  Resolution Fixed [ 1 ]
                  richard Richard Linchangco (Inactive) made changes -
                  Resolution Fixed [ 1 ]
                  Status Resolved [ 5 ] Reopened [ 4 ]
                  Assigned Group [jira-developers]
                  alyssa Alyssa Gulledge (Inactive) made changes -
                  Link This issue relates to BUG-682 [ BUG-682 ]
                  alyssa Alyssa Gulledge (Inactive) made changes -
                  Status Reopened [ 4 ] Closed [ 6 ]
                  Resolution Fixed [ 1 ]
                  ann.loraine Ann Loraine made changes -
                  Link This issue relates to IGBF-2865 [ IGBF-2865 ]

                    People

                    • Assignee:
                      Unassigned
                      Reporter:
                      ann.loraine Ann Loraine
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                      Dates

                      • Created:
                        Updated:
                        Resolved: