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  1. Bug Repository
  2. BUG-29

Light gray stripes vertical stripes appear in IGB.

          Details

          • Type: Bug
          • Status: Closed (View Workflow)
          • Priority: Major
          • Resolution: Fixed
          • Labels:
            None

            Description

            (1) Reset preferences to defaults, ant run
            (2) Choose species Arabidopsis thaliana
            (3) Choose Genome A_thaliana_Jun_2009
            (4) Observe TAIR10 mRNA gene models appear in chromosome 1
            (5) Choose "genome" sequence

            Observe multiple gray stripes appear in the region marked as chromosome 1.
            See attached PNGs.

            (6) Zoom in close to one of the gray stripes. Observe they are one base
            wide.

            I repeated it a few times - it seems to only affect the second part of
            chromosome 1.

              Attachments

                Issue Links

                relates to

                Task - A task that needs to be done. BUG-681 Main Window functions

                • Blocker - Blocks development and/or testing work, production could not run.
                • Closed

                  Activity

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                  ann.loraine Ann Loraine created issue -
                  alyssa Alyssa Gulledge (Inactive) made changes -
                  Field Original Value New Value
                  Assignee Alyssa Gulledge [ alyssa ] Adam Baxter [ adam ]
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                  adam Adam Baxter (Inactive) added a comment -

                  Issue no longer present as of svn version 7791.

                  Show
                  adam Adam Baxter (Inactive) added a comment - Issue no longer present as of svn version 7791.
                  adam Adam Baxter (Inactive) made changes -
                  Status Open [ 1 ] Resolved [ 5 ]
                  Resolution Fixed [ 1 ]
                  alyssa Alyssa Gulledge (Inactive) made changes -
                  Status Resolved [ 5 ] Closed [ 6 ]
                  alyssa Alyssa Gulledge (Inactive) made changes -
                  Project IGB6.5 [ 10010 ] Bug Repository [ 10030 ]
                  Key IGB-102 BUG-29
                  alyssa Alyssa Gulledge (Inactive) made changes -
                  Resolution Fixed [ 1 ]
                  Status Closed [ 6 ] Reopened [ 4 ]
                  david David Norris (Inactive) made changes -
                  Assignee Adam Baxter [ adam ]
                  david David Norris (Inactive) made changes -
                  Status Reopened [ 4 ] Resolved [ 5 ]
                  Resolution Fixed [ 1 ]
                  david David Norris (Inactive) made changes -
                  Status Resolved [ 5 ] Closed [ 6 ]
                  alyssa Alyssa Gulledge (Inactive) made changes -
                  Resolution Fixed [ 1 ]
                  Status Closed [ 6 ] Reopened [ 4 ]
                  Assignee Katharine Kubiak [ kkubiak ]
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                  kkubiak Katharine Kubiak (Inactive) added a comment -

                  Passed 6.7.0 (Windows)

                  Show
                  kkubiak Katharine Kubiak (Inactive) added a comment - Passed 6.7.0 (Windows)
                  kkubiak Katharine Kubiak (Inactive) made changes -
                  Assignee Katharine Kubiak [ kkubiak ] Anuj Puram [ anuj ]
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                  anuj Anuj Puram (Inactive) added a comment -

                  Passed 6.7.0 on Mac

                  Show
                  anuj Anuj Puram (Inactive) added a comment - Passed 6.7.0 on Mac
                  anuj Anuj Puram (Inactive) made changes -
                  Assignee Anuj Puram [ anuj ] Alyssa Gulledge [ alyssa ]
                  alyssa Alyssa Gulledge (Inactive) made changes -
                  Status Reopened [ 4 ] Resolved [ 5 ]
                  Assignee Alyssa Gulledge [ alyssa ]
                  Resolution Fixed [ 1 ]
                  alyssa Alyssa Gulledge (Inactive) made changes -
                  Status Resolved [ 5 ] Closed [ 6 ]
                  darius darius made changes -
                  Resolution Fixed [ 1 ]
                  Status Closed [ 6 ] Reopened [ 4 ]
                  Assignee Darius Bost [ darius ]
                  darius darius made changes -
                  Status Reopened [ 4 ] Resolved [ 5 ]
                  Assignee Darius Bost [ darius ]
                  Resolution Fixed [ 1 ]
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                  darius darius added a comment -

                  passed 7.0.0(11795)

                  Show
                  darius darius added a comment - passed 7.0.0(11795)
                  richard Richard Linchangco (Inactive) made changes -
                  Resolution Fixed [ 1 ]
                  Status Resolved [ 5 ] Reopened [ 4 ]
                  alyssa Alyssa Gulledge (Inactive) made changes -
                  Link This issue relates to BUG-681 [ BUG-681 ]
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                  richard Richard Linchangco (Inactive) added a comment -

                  Passed V.13816, Mac, Java 1.7.0_10

                  Gray stripes do not appear in any instances described.

                  Show
                  richard Richard Linchangco (Inactive) added a comment - Passed V.13816, Mac, Java 1.7.0_10 Gray stripes do not appear in any instances described.
                  richard Richard Linchangco (Inactive) made changes -
                  Status Reopened [ 4 ] Resolved [ 5 ]
                  Resolution Fixed [ 1 ]
                  richard Richard Linchangco (Inactive) made changes -
                  Status Resolved [ 5 ] Closed [ 6 ]

                    People

                    • Assignee:
                      Unassigned
                      Reporter:
                      ann.loraine Ann Loraine
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                      Dates

                      • Created:
                        Updated:
                        Resolved: