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  1. Bug Repository
  2. BUG-305

Handle VCF files

          Details

          • Type: Task
          • Status: Closed (View Workflow)
          • Priority: Minor
          • Resolution: Fixed
          • Labels:
            None

            Description

            Add the ability to process .vcf files

            Download BOTH attached files into same folder. Drag and drop the .vcf.gz (not the .vcf.gz.tbi). Make sure you can see it.

              Attachments

                Issue Links

                relates to

                Task - A task that needs to be done. BUG-622 File format issues

                • Blocker - Blocks development and/or testing work, production could not run.
                • Closed

                  Activity

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                  lfrohman Lance Frohman (Inactive) created issue -
                  lfrohman Lance Frohman (Inactive) made changes -
                  Field Original Value New Value
                  Status Open [ 1 ] Resolved [ 5 ]
                  Resolution Fixed [ 1 ]
                  alyssa Alyssa Gulledge (Inactive) made changes -
                  Resolution Fixed [ 1 ]
                  Status Resolved [ 5 ] Reopened [ 4 ]
                  Assignee Lance Frohman [ lfrohman ] Alyssa Gulledge [ alyssa ]
                  alyssa Alyssa Gulledge (Inactive) made changes -
                  Attachment ALL.chr20.vqsr_2of5_union_200_sites_for_validation.20101123.indels.genotypes.vcf.gz [ 10851 ]
                  Attachment ALL.chr20.vqsr_2of5_union_200_sites_for_validation.20101123.indels.genotypes.vcf.gz.tbi [ 10852 ]
                  Description Add the ability to process .vcf files - this will be dome as a separate bundle.
                  		 Add the ability to process .vcf files - this will be dome as a separate bundle.

                  Add VCF handler plug in. Download BOTH attached files into same folder. Drag and drop the .vcf.gz (not the .vcf.gz.tbi). Make sure you can see it.
                  alyssa Alyssa Gulledge (Inactive) made changes -
                  Status Reopened [ 4 ] Resolved [ 5 ]
                  Assignee Alyssa Gulledge [ alyssa ]
                  Resolution Fixed [ 1 ]
                  alyssa Alyssa Gulledge (Inactive) made changes -
                  Status Resolved [ 5 ] Closed [ 6 ]
                  alyssa Alyssa Gulledge (Inactive) made changes -
                  Project Genentech [ 10034 ] Bug Repository [ 10030 ]
                  Key TODO-2 BUG-305
                  fwang4 Fuquan Wang (Inactive) made changes -
                  Resolution Fixed [ 1 ]
                  Status Closed [ 6 ] Reopened [ 4 ]
                  Assignee Fuquan Wang [ fwang4 ]
                  fwang4 Fuquan Wang (Inactive) made changes -
                  Assignee Fuquan Wang [ fwang4 ] Alyssa Gulledge [ alyssa ]
                  alyssa Alyssa Gulledge (Inactive) made changes -
                  Assignee Alyssa Gulledge [ alyssa ] Lance Frohman [ lfrohman ]
                  lfrohman Lance Frohman (Inactive) made changes -
                  Assignee Lance Frohman [ lfrohman ] Alyssa Gulledge [ alyssa ]
                  alyssa Alyssa Gulledge (Inactive) made changes -
                  Status Reopened [ 4 ] Resolved [ 5 ]
                  Assignee Alyssa Gulledge [ alyssa ]
                  Resolution Fixed [ 1 ]
                  alyssa Alyssa Gulledge (Inactive) made changes -
                  Status Resolved [ 5 ] Closed [ 6 ]
                  richard Richard Linchangco (Inactive) made changes -
                  Resolution Fixed [ 1 ]
                  Status Closed [ 6 ] Reopened [ 4 ]
                  alyssa Alyssa Gulledge (Inactive) made changes -
                  Link This issue relates to BUG-622 [ BUG-622 ]
                  richard Richard Linchangco (Inactive) made changes -
                  Assignee Alyssa Gulledge [ alyssa ]
                  alyssa Alyssa Gulledge (Inactive) made changes -
                  Assignee Alyssa Gulledge [ alyssa ] Richard Linchangco [ richard ]
                  Reporter Lance Frohman [ lfrohman ] Alyssa Gulledge [ alyssa ]
                  Description Add the ability to process .vcf files - this will be dome as a separate bundle.

                  Add VCF handler plug in. Download BOTH attached files into same folder. Drag and drop the .vcf.gz (not the .vcf.gz.tbi). Make sure you can see it.
                  		 Add the ability to process .vcf files

                  Download BOTH attached files into same folder. Drag and drop the .vcf.gz (not the .vcf.gz.tbi). Make sure you can see it.
                  richard Richard Linchangco (Inactive) made changes -
                  Status Reopened [ 4 ] Resolved [ 5 ]
                  Assignee Richard Linchangco [ richard ] Alyssa Gulledge [ alyssa ]
                  Resolution Fixed [ 1 ]
                  alyssa Alyssa Gulledge (Inactive) made changes -
                  Resolution Fixed [ 1 ]
                  Status Resolved [ 5 ] Reopened [ 4 ]
                  Assignee Alyssa Gulledge [ alyssa ]
                  richard Richard Linchangco (Inactive) made changes -
                  Status Reopened [ 4 ] Resolved [ 5 ]
                  Assignee Alyssa Gulledge [ alyssa ]
                  Resolution Fixed [ 1 ]
                  alyssa Alyssa Gulledge (Inactive) made changes -
                  Assignee Alyssa Gulledge [ alyssa ]
                  alyssa Alyssa Gulledge (Inactive) made changes -
                  Status Resolved [ 5 ] Closed [ 6 ]

                    People

                    • Assignee:
                      Unassigned
                      Reporter:
                      alyssa Alyssa Gulledge (Inactive)
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                      Dates

                      • Created:
                        Updated:
                        Resolved: