Details
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Type:
Bug
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Status: Closed (View Workflow)
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Priority:
Major
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Resolution: Fixed
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Labels:None
Description
Hi guys,
Robert handed me this:
INFO: URL: http://netaffxdas.affymetrix.com/quickload_data/H_sapiens_Feb_2009/chr1.bnib Response Code: 200
java.lang.NullPointerException
at com.affymetrix.genometryImpl.symmetry.SimpleMutableSeqSymmetry.removeChild(SimpleMutableSeqSymmetry.java:56)
at com.affymetrix.genometryImpl.BioSeq.removeAnnotation(BioSeq.java:332)
at com.affymetrix.genometryImpl.BioSeq.removeAnnotation(BioSeq.java:310)
at com.affymetrix.igb.view.DependentData.createTier(DependentData.java:63)
at com.affymetrix.igb.view.TrackView.updateDependentData(TrackView.java:288)
at com.affymetrix.igb.featureloader.QuickLoad$1.doInBackground(QuickLoad.java:177)
at com.affymetrix.igb.featureloader.QuickLoad$1.doInBackground(QuickLoad.java:161)
at javax.swing.SwingWorker$1.call(SwingWorker.java:274)
at java.util.concurrent.FutureTask$Sync.innerRun(FutureTask.java:303)
at java.util.concurrent.FutureTask.run(FutureTask.java:138)
at javax.swing.SwingWorker.run(SwingWorker.java:313)
at java.util.concurrent.ThreadPoolExecutor$Worker.runTask(ThreadPoolExecutor.java:886)
at java.util.concurrent.ThreadPoolExecutor$Worker.run(ThreadPoolExecutor.java:908)
at java.lang.Thread.run(Thread.java:637)
Not sure what triggers this - but there are quite a few in the console (and this seems to be the only exception, there
are a few other tidbits of INFO),
—
Obviously, this is not a lot to go on, but maybe it's enough of a hint?
Thanks
Attachments
Issue Links
- relates to
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BUG-622 File format issues
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- Closed
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Activity
| Field | Original Value | New Value |
|---|---|---|
| Assignee | Ann Loraine [ aloraine ] | Hiral Vora [ hiralv ] |
| Assignee | Hiral Vora [ hiralv ] | Alyssa Gulledge [ alyssa ] |
| Status | Open [ 1 ] | Resolved [ 5 ] |
| Resolution | Fixed [ 1 ] |
| Status | Resolved [ 5 ] | Closed [ 6 ] |
| Resolution | Fixed [ 1 ] | |
| Status | Closed [ 6 ] | Reopened [ 4 ] |
| Assignee | Alyssa Gulledge [ alyssa ] |
| Status | Reopened [ 4 ] | Resolved [ 5 ] |
| Resolution | Fixed [ 1 ] |
| Status | Resolved [ 5 ] | Closed [ 6 ] |
| Resolution | Fixed [ 1 ] | |
| Status | Closed [ 6 ] | Reopened [ 4 ] |
| Assignee | Katharine Kubiak [ kkubiak ] |
| Assignee | Katharine Kubiak [ kkubiak ] | Alyssa Gulledge [ alyssa ] |
| Assignee | Alyssa Gulledge [ alyssa ] | Hiral Vora [ hiralv ] |
| Assignee | Hiral Vora [ hiralv ] |
| Assignee | Alyssa Gulledge [ alyssa ] |
| Status | Reopened [ 4 ] | Resolved [ 5 ] |
| Assignee | Alyssa Gulledge [ alyssa ] | |
| Resolution | Fixed [ 1 ] |
| Status | Resolved [ 5 ] | Closed [ 6 ] |
| Resolution | Fixed [ 1 ] | |
| Status | Closed [ 6 ] | Reopened [ 4 ] |
| Assignee | Fuquan Wang [ fwang4 ] |
| Status | Reopened [ 4 ] | Resolved [ 5 ] |
| Assignee | Fuquan Wang [ fwang4 ] | |
| Resolution | Fixed [ 1 ] |
| Resolution | Fixed [ 1 ] | |
| Status | Resolved [ 5 ] | Reopened [ 4 ] |
| Status | Reopened [ 4 ] | Closed [ 6 ] |
| Resolution | Fixed [ 1 ] |