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  1. Bug Repository
  2. BUG-341

6.7.0: drag and drop of multiple WIG files

    Details

    • Type: Bug
    • Status: Closed (View Workflow)
    • Priority: Major
    • Resolution: Fixed
    • Labels:
      None

      Description

      From Bastien Chevreux on sourceforge ID: 3495903

      there is a regression error in 6.7.0 which was not in 6.6.3: dragging multiple WIG files from the desktop and dropping them to IGB, this creates multiple species / multiple genomes (one for each file) although the sequence names in the WIG files are the same (and thus should be assigned to the same unknown species / genome). When loading the same files in 6.7.0 via the file interface (or drag & drop in 6.6.3), the error does not occur and everything is OK.

      How to reproduce: unpack the attached ZIP with two tiny test WIGs. To see the expected state: in 6.7.0, load these WIGs via the file interface (also choose load whole genome). You should then see the two data sets displayed one above the other. Notice that both files where assigned to "Unknown species 1". To see the unexpected error state: restart 6.7.0. Then simply select BOTH files and at the same time, drag and drop the two attached WIGs into IGB. Notice that now the files are assigned to "Unknown species 1" and "Unknown species 2", making it impossible to display both data sets at the same time.

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            alyssa Alyssa Gulledge (Inactive) created issue -
            kkubiak Katharine Kubiak (Inactive) made changes -
            Field Original Value New Value
            Assignee Katharine Kubiak [ kkubiak ] Hiral Vora [ hiralv ]
            alyssa Alyssa Gulledge (Inactive) made changes -
            Assignee Hiral Vora [ hiralv ] Alyssa Gulledge [ alyssa ]
            alyssa Alyssa Gulledge (Inactive) made changes -
            Assignee Alyssa Gulledge [ alyssa ] Hiral Vora [ hiralv ]
            hiralv Hiral Vora (Inactive) made changes -
            Project IGB 6.7 [ 10040 ] IGB 7.0 [ 10140 ]
            Key IGBB-356 IGBC-126
            hiralv Hiral Vora (Inactive) made changes -
            Assignee Hiral Vora [ hiralv ] Anuj Puram [ anuj ]
            anuj Anuj Puram (Inactive) made changes -
            Assignee Anuj Puram [ anuj ] Alyssa Gulledge [ alyssa ]
            alyssa Alyssa Gulledge (Inactive) made changes -
            Description From Bastien Chevreux on sourceforge ID: 3495903

            there is a regression error in 6.7.0 which was not in 6.6.3: dragging multiple WIG files from the desktop and dropping them to IGB, this creates multiple species / multiple genomes (one for each file) although the sequence names in the WIG files are the same (and thus should be assigned to the same unknown species / genome). When loading the same files in 6.7.0 via the file interface (or drag & drop in 6.6.3), the error does not occur and everything is OK.

            How to reproduce: unpack the attached ZIP with two tiny test WIGs. To see the expected state: in 6.7.0, load these WIGs via the file interface (also choose load whole genome). You should then see the two data sets displayed one above the other. Notice that both files where assigned to "Unknown species 1". To see the unexpected error state: restart 6.7.0. Then simply drag and drop the two attached WIGs into IGB. Notice that now the files are assigned to "Unknown species 1" and "Unknown species 2", making it impossible to display both data sets at the same time.
            From Bastien Chevreux on sourceforge ID: 3495903

            there is a regression error in 6.7.0 which was not in 6.6.3: dragging multiple WIG files from the desktop and dropping them to IGB, this creates multiple species / multiple genomes (one for each file) although the sequence names in the WIG files are the same (and thus should be assigned to the same unknown species / genome). When loading the same files in 6.7.0 via the file interface (or drag & drop in 6.6.3), the error does not occur and everything is OK.

            How to reproduce: unpack the attached ZIP with two tiny test WIGs. To see the expected state: in 6.7.0, load these WIGs via the file interface (also choose load whole genome). You should then see the two data sets displayed one above the other. Notice that both files where assigned to "Unknown species 1". To see the unexpected error state: restart 6.7.0. Then simply select BOTH files and at the same time, drag and drop the two attached WIGs into IGB. Notice that now the files are assigned to "Unknown species 1" and "Unknown species 2", making it impossible to display both data sets at the same time.
            alyssa Alyssa Gulledge (Inactive) made changes -
            Status Open [ 1 ] Resolved [ 5 ]
            Assignee Alyssa Gulledge [ alyssa ]
            Resolution Fixed [ 1 ]
            alyssa Alyssa Gulledge (Inactive) made changes -
            Status Resolved [ 5 ] Closed [ 6 ]
            alyssa Alyssa Gulledge (Inactive) made changes -
            Project IGB 7.0 [ 10140 ] Bug Repository [ 10030 ]
            Key IGBC-126 BUG-341
            fwang4 Fuquan Wang (Inactive) made changes -
            Resolution Fixed [ 1 ]
            Status Closed [ 6 ] Reopened [ 4 ]
            Assignee Fuquan Wang [ fwang4 ]
            fwang4 Fuquan Wang (Inactive) made changes -
            Status Reopened [ 4 ] Resolved [ 5 ]
            Assignee Fuquan Wang [ fwang4 ]
            Resolution Fixed [ 1 ]
            richard Richard Linchangco (Inactive) made changes -
            Resolution Fixed [ 1 ]
            Status Resolved [ 5 ] Reopened [ 4 ]
            alyssa Alyssa Gulledge (Inactive) made changes -
            Link This issue relates to BUG-622 [ BUG-622 ]
            alyssa Alyssa Gulledge (Inactive) made changes -
            Link This issue relates to BUG-623 [ BUG-623 ]
            richard Richard Linchangco (Inactive) made changes -
            Link This issue relates to BUG-623 [ BUG-623 ]
            richard Richard Linchangco (Inactive) made changes -
            Status Reopened [ 4 ] Resolved [ 5 ]
            Assignee Alyssa Gulledge [ alyssa ]
            Resolution Fixed [ 1 ]
            alyssa Alyssa Gulledge (Inactive) made changes -
            Resolution Fixed [ 1 ]
            Status Resolved [ 5 ] Reopened [ 4 ]
            Assignee Alyssa Gulledge [ alyssa ]
            richard Richard Linchangco (Inactive) made changes -
            Status Reopened [ 4 ] Resolved [ 5 ]
            Assignee Alyssa Gulledge [ alyssa ]
            Resolution Fixed [ 1 ]
            alyssa Alyssa Gulledge (Inactive) made changes -
            Status Resolved [ 5 ] Closed [ 6 ]
            Assignee Alyssa Gulledge [ alyssa ]

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              • Assignee:
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                Reporter:
                alyssa Alyssa Gulledge (Inactive)
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                • Created:
                  Updated:
                  Resolved: