Uploaded image for project: 'Bug Repository'
  1. Bug Repository
  2. BUG-343

Exception on Console by Map sites button click in Restriction sites tab

    Details

    • Type: Bug
    • Status: Closed (View Workflow)
    • Priority: Major
    • Resolution: Fixed
    • Labels:
      None
    • Environment:

      Mac OS

      Description

      When I tried to select an enzymes in the Restriction sites tab and clicked on Map sites button the following exception is thrown in the console

      Exception in thread "pool-13-thread-2" java.lang.OutOfMemoryError: Java heap space
      at java.nio.HeapByteBuffer.<init>(HeapByteBuffer.java:39)
      at java.nio.ByteBuffer.allocate(ByteBuffer.java:312)
      at com.affymetrix.genometryImpl.util.TwoBitIterator.parse(TwoBitIterator.java:196)
      at com.affymetrix.genometryImpl.util.TwoBitIterator.substring(TwoBitIterator.java:176)
      at com.affymetrix.genometryImpl.symloader.TwoBit.getRegionResidues(TwoBit.java:88)
      at com.affymetrix.igb.general.ResidueLoading.GetQuickLoadResidues(ResidueLoading.java:219)
      at com.affymetrix.igb.general.ResidueLoading.getQuickLoadResidues(ResidueLoading.java:171)
      at com.affymetrix.igb.general.ResidueLoading.getResidues(ResidueLoading.java:86)
      at com.affymetrix.igb.view.load.GeneralLoadUtils.loadResidues(GeneralLoadUtils.java:992)
      at com.affymetrix.igb.view.load.GeneralLoadView.loadResidues(GeneralLoadView.java:230)
      at com.affymetrix.igb.view.load.GeneralLoadView.loadResidues(GeneralLoadView.java:223)
      at com.affymetrix.igb.action.LoadResidueAction.actionPerformed(LoadResidueAction.java:75)
      at com.affymetrix.igb.restrictions.RestrictionControlView$GlyphifyMatchesThread.run(RestrictionControlView.java:261)
      at java.lang.Thread.run(Thread.java:680)
      at java.util.concurrent.ThreadPoolExecutor$Worker.runTask(ThreadPoolExecutor.java:886)
      at java.util.concurrent.ThreadPoolExecutor$Worker.run(ThreadPoolExecutor.java:908)
      at java.lang.Thread.run(Thread.java:680)

        Attachments

          Issue Links

            Activity

            No work has yet been logged on this issue.

              People

              • Assignee:
                Unassigned
                Reporter:
                anuj Anuj Puram (Inactive)
              • Votes:
                0 Vote for this issue
                Watchers:
                0 Start watching this issue

                Dates

                • Created:
                  Updated:
                  Resolved: