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  1. Bug Repository
  2. BUG-344

imprecision when entering a range

          Details

          • Type: Bug
          • Status: Closed (View Workflow)
          • Priority: Minor
          • Resolution: Fixed
          • Labels:
            None

            Description

            When entering a range into the range box, IGB will zoom to the approximate region, but not the exact region specified. For example, on hg19, entering "chr4:100-10000" will send IGB to something like "chr4:0-10420". Strangely, entering the same range again will send IGB to the correct location.

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                Task - A task that needs to be done. BUG-648 Search bugs

                • Blocker - Blocks development and/or testing work, production could not run.
                • Closed

                  Activity

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                  tkanapar Tarun Santosh (Inactive) added a comment -

                  Passed (7.0.4) 15393(Mac)

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                  tkanapar Tarun Santosh (Inactive) added a comment - Passed (7.0.4) 15393(Mac)
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                  darius darius added a comment -

                  Passed 7.0.0 (11806)

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                  darius darius added a comment - Passed 7.0.0 (11806)
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                  hiralv Hiral Vora (Inactive) added a comment -

                  Fixed on trunk in r10990.

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                  hiralv Hiral Vora (Inactive) added a comment - Fixed on trunk in r10990.
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                  alyssa Alyssa Gulledge (Inactive) added a comment -

                  I can get this to happen... On my Mac, if you set genome to homo sapiens, and then enter the range chr4:100-10000, I get chr4 : 0 - 10,117. Then I can get it to refine down to what I asked for... and any other changes I make in the range box afterwards works correctly. It is first time you enter values for a new chromosome that they are incorrect.

                  Show
                  alyssa Alyssa Gulledge (Inactive) added a comment - I can get this to happen... On my Mac, if you set genome to homo sapiens, and then enter the range chr4:100-10000, I get chr4 : 0 - 10,117. Then I can get it to refine down to what I asked for... and any other changes I make in the range box afterwards works correctly. It is first time you enter values for a new chromosome that they are incorrect.
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                  anuj Anuj Puram (Inactive) added a comment -

                  cannot reproduce it on r10791

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                  anuj Anuj Puram (Inactive) added a comment - cannot reproduce it on r10791

                    People

                    • Assignee:
                      Unassigned
                      Reporter:
                      michafla Michael Lawrence (Inactive)
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                      Dates

                      • Created:
                        Updated:
                        Resolved: