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  1. Bug Repository
  2. BUG-467

'Indexed' read Data loads in 'bigger' than the view window.

          Details

          • Type: Bug
          • Status: Closed (View Workflow)
          • Priority: Major
          • Resolution: Fixed
          • Labels:
            None

            Description

            Run a clean IGB. Load A. thal, make 1 track. Zoom to 2-3 genes. Load 'control alignment' from RNA>Lab>Mixed>SM>Reads. Notice that it loads the data - but it fills the image frame and pushes the tair 10 data down. The labels stay in place.

            Now use the vert. zoom and move it to max zoom out. You STILL have vertical height adjuster on right. You only see 1/2 of tair 10 and you can't see the coordinate axis. You can NOT get all the data to show at once.

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                Issue Links

                relates to

                Task - A task that needs to be done. BUG-681 Main Window functions

                • Blocker - Blocks development and/or testing work, production could not run.
                • Closed

                  Activity

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                  alyssa Alyssa Gulledge (Inactive) created issue -
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                  hiralv Hiral Vora (Inactive) added a comment -

                  Fixed in r12138.

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                  hiralv Hiral Vora (Inactive) added a comment - Fixed in r12138.
                  hiralv Hiral Vora (Inactive) made changes -
                  Field Original Value New Value
                  Assignee Hiral Vora [ hiralv ] Alyssa Gulledge [ alyssa ]
                  alyssa Alyssa Gulledge (Inactive) made changes -
                  Status Open [ 1 ] Resolved [ 5 ]
                  Assignee Alyssa Gulledge [ alyssa ]
                  Resolution Fixed [ 1 ]
                  alyssa Alyssa Gulledge (Inactive) made changes -
                  Status Resolved [ 5 ] Closed [ 6 ]
                  alyssa Alyssa Gulledge (Inactive) made changes -
                  Project IGB 7.0 [ 10140 ] Bug Repository [ 10030 ]
                  Key IGBC-333 BUG-467
                  richard Richard Linchangco (Inactive) made changes -
                  Resolution Fixed [ 1 ]
                  Status Closed [ 6 ] Reopened [ 4 ]
                  alyssa Alyssa Gulledge (Inactive) made changes -
                  Link This issue relates to BUG-681 [ BUG-681 ]
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                  richard Richard Linchangco (Inactive) added a comment -

                  Passed V.13816, Mac, Java 1.7.0_10

                  Short read file located now under IGB Quickload:

                  • Loraine Lab
                    • Mixed Cold
                      • SM
                        • Reads
                          • Control, alignments

                  Even with TAIR10 split into + and - strand separate tracks there is no issue loading the 'Control, alignments' and viewing all tracks simultaneously. Vertical zoom remains at the minimal zoom level once all tracks are loaded.

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                  richard Richard Linchangco (Inactive) added a comment - Passed V.13816, Mac, Java 1.7.0_10 Short read file located now under IGB Quickload: Loraine Lab Mixed Cold SM Reads Control, alignments Even with TAIR10 split into + and - strand separate tracks there is no issue loading the 'Control, alignments' and viewing all tracks simultaneously. Vertical zoom remains at the minimal zoom level once all tracks are loaded.
                  richard Richard Linchangco (Inactive) made changes -
                  Status Reopened [ 4 ] Resolved [ 5 ]
                  Resolution Fixed [ 1 ]
                  richard Richard Linchangco (Inactive) made changes -
                  Status Resolved [ 5 ] Closed [ 6 ]

                    People

                    • Assignee:
                      Unassigned
                      Reporter:
                      alyssa Alyssa Gulledge (Inactive)
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                      Dates

                      • Created:
                        Updated:
                        Resolved: