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  1. Bug Repository
  2. BUG-475

Splitting joined tracks causes NPE

    Details

    • Type: Bug
    • Status: Closed (View Workflow)
    • Priority: Major
    • Resolution: Fixed
    • Labels:
      None

      Description

      join 2 graphs. the split. Get:
      Exception in thread "AWT-EventQueue-0" java.lang.NullPointerException
      at com.affymetrix.igb.trackAdjuster.TrackPreferencesSeqMapViewPanel.collectSymsAndGlyphs(TrackPreferencesSeqMapViewPanel.java:55)
      at com.affymetrix.igb.trackAdjuster.TrackPreferencesSeqMapViewPanel.refreshSelection(TrackPreferencesSeqMapViewPanel.java:118)
      at com.affymetrix.igb.trackAdjuster.TrackPreferencesSeqMapViewPanel.trackstylePropertyChanged(TrackPreferencesSeqMapViewPanel.java:170)
      at com.affymetrix.igb.shared.TrackstylePropertyMonitor.firePropertyChanged(TrackstylePropertyMonitor.java:47)
      at com.affymetrix.igb.shared.TrackstylePropertyMonitor.tableChanged(TrackstylePropertyMonitor.java:29)
      at javax.swing.table.AbstractTableModel.fireTableChanged(AbstractTableModel.java:280)
      at javax.swing.table.AbstractTableModel.fireTableDataChanged(AbstractTableModel.java:182)
      at com.affymetrix.igb.prefs.TierPrefsView.refreshList(TierPrefsView.java:237)
      at com.affymetrix.igb.prefs.TierPreferencesPanel.mapRefresh(TierPreferencesPanel.java:37)
      at com.affymetrix.igb.view.SeqMapView.setAnnotatedSeq(SeqMapView.java:893)
      at com.affymetrix.igb.view.SeqMapView.setAnnotatedSeq(SeqMapView.java:724)
      at com.affymetrix.igb.trackOperations.TrackOperationsTab$5.run(TrackOperationsTab.java:204)
      at java.awt.event.InvocationEvent.dispatch(InvocationEvent.java:209)
      at java.awt.EventQueue.dispatchEventImpl(EventQueue.java:682)
      at java.awt.EventQueue.access$000(EventQueue.java:85)
      at java.awt.EventQueue$1.run(EventQueue.java:643)
      at java.awt.EventQueue$1.run(EventQueue.java:641)
      at java.security.AccessController.doPrivileged(Native Method)
      at java.security.AccessControlContext$1.doIntersectionPrivilege(AccessControlContext.java:87)
      at java.awt.EventQueue.dispatchEvent(EventQueue.java:652)
      at java.awt.EventDispatchThread.pumpOneEventForFilters(EventDispatchThread.java:296)
      at java.awt.EventDispatchThread.pumpEventsForFilter(EventDispatchThread.java:211)
      at java.awt.EventDispatchThread.pumpEventsForHierarchy(EventDispatchThread.java:201)
      at java.awt.EventDispatchThread.pumpEvents(EventDispatchThread.java:196)
      at java.awt.EventDispatchThread.pumpEvents(EventDispatchThread.java:188)
      at java.awt.EventDispatchThread.run(EventDispatchThread.java:122)

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          Issue Links

            Activity

            alyssa Alyssa Gulledge (Inactive) created issue -
            lfrohman Lance Frohman (Inactive) made changes -
            Field Original Value New Value
            Assignee Hiral Vora [ hiralv ] Lance Frohman [ lfrohman ]
            lfrohman Lance Frohman (Inactive) made changes -
            Assignee Lance Frohman [ lfrohman ] Alyssa Gulledge [ alyssa ]
            lfrohman Lance Frohman (Inactive) made changes -
            Assignee Alyssa Gulledge [ alyssa ] Lance Frohman [ lfrohman ]
            lfrohman Lance Frohman (Inactive) made changes -
            Assignee Lance Frohman [ lfrohman ] Alyssa Gulledge [ alyssa ]
            alyssa Alyssa Gulledge (Inactive) made changes -
            Assignee Alyssa Gulledge [ alyssa ] Katharine Kubiak [ kkubiak ]
            kkubiak Katharine Kubiak (Inactive) made changes -
            Assignee Katharine Kubiak [ kkubiak ] Lance Frohman [ lfrohman ]
            lfrohman Lance Frohman (Inactive) made changes -
            Assignee Lance Frohman [ lfrohman ] Katharine Kubiak [ kkubiak ]
            kkubiak Katharine Kubiak (Inactive) made changes -
            Status Open [ 1 ] Resolved [ 5 ]
            Assignee Katharine Kubiak [ kkubiak ]
            Resolution Fixed [ 1 ]
            kkubiak Katharine Kubiak (Inactive) made changes -
            Project IGB 7.0 [ 10140 ] Bug Repository [ 10030 ]
            Key IGBC-329 BUG-475
            richard Richard Linchangco (Inactive) made changes -
            Resolution Fixed [ 1 ]
            Status Resolved [ 5 ] Reopened [ 4 ]
            alyssa Alyssa Gulledge (Inactive) made changes -
            Link This issue relates to BUG-637 [ BUG-637 ]
            richard Richard Linchangco (Inactive) made changes -
            Status Reopened [ 4 ] Resolved [ 5 ]
            Assignee Alyssa Gulledge [ alyssa ]
            Resolution Fixed [ 1 ]
            alyssa Alyssa Gulledge (Inactive) made changes -
            Status Resolved [ 5 ] Closed [ 6 ]
            alyssa Alyssa Gulledge (Inactive) made changes -
            Resolution Fixed [ 1 ]
            Status Closed [ 6 ] Reopened [ 4 ]
            alyssa Alyssa Gulledge (Inactive) made changes -
            Status Reopened [ 4 ] Closed [ 6 ]
            Assignee Alyssa Gulledge [ alyssa ]
            Resolution Fixed [ 1 ]

              People

              • Assignee:
                Unassigned
                Reporter:
                alyssa Alyssa Gulledge (Inactive)
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                Dates

                • Created:
                  Updated:
                  Resolved: