Details
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Type:
Bug
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Status: Closed (View Workflow)
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Priority:
Minor
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Resolution: Fixed
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Labels:None
Description
- Load h_sapiens
- chr1
- Data Access tab selected
- select top 3 icons (forward strand) at 145,413,190 (see attached)
- select Selection Info tab
- select Sliced View tab
it throws a NPE. I fixed it in two places
GileTypeHolder.java
public FileTypeHandler getFileTypeHandlerForURI(String uri) {
if (uri == null)
// code
. . .
and
GeneralUtils.java
public static String stripEndings(String name) {
for (int i=0; i<compression_endings.length; i++) {
String ending = compression_endings[i].toLowerCase();
if (name != null && name.toLowerCase().endsWith(ending)) { // "name != null && " added
when I make these changes, then try again, the Alt Splice View loops
Attachments
Issue Links
- relates to
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BUG-661 Sliced View
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- Closed
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Activity
| Field | Original Value | New Value |
|---|---|---|
| Assignee | Alyssa Gulledge [ alyssa ] |
| Assignee | Alyssa Gulledge [ alyssa ] | Hiral Vora [ hiralv ] |
| Assignee | Hiral Vora [ hiralv ] | Alyssa Gulledge [ alyssa ] |
| Attachment | load.PNG [ 11090 ] |
| Assignee | Alyssa Gulledge [ alyssa ] | Hiral Vora [ hiralv ] |
| Assignee | Hiral Vora [ hiralv ] | Fuquan Wang [ fwang4 ] |
| Assignee | Fuquan Wang [ fwang4 ] | Katharine Kubiak [ kkubiak ] |
| Status | Open [ 1 ] | Resolved [ 5 ] |
| Assignee | Katharine Kubiak [ kkubiak ] | |
| Resolution | Fixed [ 1 ] |
| Status | Resolved [ 5 ] | Closed [ 6 ] |
| Resolution | Fixed [ 1 ] | |
| Status | Closed [ 6 ] | Reopened [ 4 ] |
| Status | Reopened [ 4 ] | Closed [ 6 ] |
| Resolution | Fixed [ 1 ] |
Fixed. Test it out.