Uploaded image for project: 'Bug Repository'
  1. Bug Repository
  2. BUG-570

the data in the detail (final) field did not appear in the Selection Info tab or tooltip.

          Details

          • Type: Bug
          • Status: Closed (View Workflow)
          • Priority: Minor
          • Resolution: Fixed
          • Labels:
            None

            Description

            Please find attached a bed detail file I made for rice (O sativa).

            When I opened it in IGB, the data in the detail (final) field did not appear in the Selection Info tab or tooltip.

            I tried it with IGB 7.

            Am I doing something wrong?

              Attachments

                Issue Links

                relates to

                Task - A task that needs to be done. BUG-656 Tabbed Panels including Selection, Restriction Enzymes

                • Blocker - Blocks development and/or testing work, production could not run.
                • Closed

                  Activity

                  Ascending order - Click to sort in descending order
                  ann.loraine Ann Loraine created issue -
                  fwang4 Fuquan Wang (Inactive) made changes -
                  Field Original Value New Value
                  Assignee Fuquan Wang [ fwang4 ] Ann Loraine [ aloraine ]
                  fwang4 Fuquan Wang (Inactive) made changes -
                  Assignee Ann Loraine [ aloraine ] Fuquan Wang [ fwang4 ]
                  fwang4 Fuquan Wang (Inactive) made changes -
                  Assignee Fuquan Wang [ fwang4 ] Ann Loraine [ aloraine ]
                  fwang4 Fuquan Wang (Inactive) made changes -
                  Assignee Ann Loraine [ aloraine ] Fuquan Wang [ fwang4 ]
                  fwang4 Fuquan Wang (Inactive) made changes -
                  Comment [ Please refer to the 'BED Detail' file format which there should be a line named 'track' with attribute 'type=bedDetail'.

                  http://genome.ucsc.edu/FAQ/FAQformat.html#format1.7

                  I tried to add the sample track line in above link to the beginning of attached bed file, then the description shows in 'Selection Info' tab. ]
                  Hide
                  Permalink
                  fwang4 Fuquan Wang (Inactive) added a comment -

                  Fixed in 12640

                  Show
                  fwang4 Fuquan Wang (Inactive) added a comment - Fixed in 12640
                  fwang4 Fuquan Wang (Inactive) made changes -
                  Assignee Fuquan Wang [ fwang4 ] Alyssa Gulledge [ alyssa ]
                  Hide
                  Permalink
                  alyssa Alyssa Gulledge (Inactive) added a comment -

                  I am still not seeing a 'detail' field in selection infor tab, and I am not seeing anything in tooltip either. v.13047

                  Show
                  alyssa Alyssa Gulledge (Inactive) added a comment - I am still not seeing a 'detail' field in selection infor tab, and I am not seeing anything in tooltip either. v.13047
                  alyssa Alyssa Gulledge (Inactive) made changes -
                  Assignee Alyssa Gulledge [ alyssa ] Fuquan Wang [ fwang4 ]
                  Hide
                  Permalink
                  fwang4 Fuquan Wang (Inactive) added a comment -

                  The mentioned 'detail' is for BED Detail file which has additional 2 fields: id & description, in IGB they are shown in 'Selection Info'.

                  Please refer to the screenshot on r13158.

                  BTW I have to rename the attached bed file to all2.bed.gz since IGB cannot recognize that file name.

                  Show
                  fwang4 Fuquan Wang (Inactive) added a comment - The mentioned 'detail' is for BED Detail file which has additional 2 fields: id & description, in IGB they are shown in 'Selection Info'. Please refer to the screenshot on r13158. BTW I have to rename the attached bed file to all2.bed.gz since IGB cannot recognize that file name.
                  fwang4 Fuquan Wang (Inactive) made changes -
                  Attachment bedDetail.png [ 11459 ]
                  fwang4 Fuquan Wang (Inactive) made changes -
                  Assignee Fuquan Wang [ fwang4 ] Alyssa Gulledge [ alyssa ]
                  alyssa Alyssa Gulledge (Inactive) made changes -
                  Status Open [ 1 ] Resolved [ 5 ]
                  Assignee Alyssa Gulledge [ alyssa ]
                  Resolution Fixed [ 1 ]
                  alyssa Alyssa Gulledge (Inactive) made changes -
                  Status Resolved [ 5 ] Closed [ 6 ]
                  alyssa Alyssa Gulledge (Inactive) made changes -
                  Project IGB 7.0 [ 10140 ] Bug Repository [ 10030 ]
                  Key IGBC-459 BUG-570
                  richard Richard Linchangco (Inactive) made changes -
                  Resolution Fixed [ 1 ]
                  Status Closed [ 6 ] Reopened [ 4 ]
                  alyssa Alyssa Gulledge (Inactive) made changes -
                  Link This issue relates to BUG-656 [ BUG-656 ]
                  Hide
                  Permalink
                  darius darius added a comment -

                  Passed in Windows XP (7.0)

                  Show
                  darius darius added a comment - Passed in Windows XP (7.0)
                  darius darius made changes -
                  Status Reopened [ 4 ] Resolved [ 5 ]
                  Resolution Fixed [ 1 ]
                  alyssa Alyssa Gulledge (Inactive) made changes -
                  Status Resolved [ 5 ] Closed [ 6 ]

                    People

                    • Assignee:
                      Unassigned
                      Reporter:
                      ann.loraine Ann Loraine
                    • Votes:
                      0 Vote for this issue
                      Watchers:
                      0 Start watching this issue

                      Dates

                      • Created:
                        Updated:
                        Resolved: