Details
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Type:
Bug
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Status: Closed (View Workflow)
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Priority:
Major
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Resolution: Fixed
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Labels:None
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Environment:
IGB 7.1
Description
selects a track. open annotation tab and click on 'Lock...' in track height panel. This means lock the height of tier in number of pixels. When a user changes the stack height, the track height remains constant but number of stack inside the track changes.
Attachments
Issue Links
- relates to
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BUG-681 Main Window functions
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- Closed
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1. |
Add option to change height of locked tier. |
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Closed | Unassigned |
Activity
| Assignee | Hiral Vora [ hiralv ] | Alyssa Gulledge [ alyssa ] |
| Description |
As always, re-assign or not as you see fit. Implement a new interaction "squish," same functionality as IGV and UCSC Genome Browser "squish": We probably already have the basic functionality in place - this request mainly addresses the UI aspects. How it works from the user's perspective: User selects a track. User clicks a short-cut button "squish" or right-clicks a track label. "Squish" option is next to "collapsed" in right-click menu. When setting is checked, max expand goes to "unlimited" (0) but the track height stays the same. When setting is unchecked, max expand goes back to what it was previously and the track height stays the same. For demo in IGV, make a NGS Viewer VM (iplant), go to TAIR10 genome, load an RNASeq data set, and right-click something in the data view. Choose the option "squish." |
THIS IS ORIGINAL IDEA OF DR. LORAINE As always, re-assign or not as you see fit. Implement a new interaction "squish," same functionality as IGV and UCSC Genome Browser "squish": We probably already have the basic functionality in place - this request mainly addresses the UI aspects. How it works from the user's perspective: User selects a track. User clicks a short-cut button "squish" or right-clicks a track label. "Squish" option is next to "collapsed" in right-click menu. When setting is checked, max expand goes to "unlimited" (0) but the track height stays the same. When setting is unchecked, max expand goes back to what it was previously and the track height stays the same. For demo in IGV, make a NGS Viewer VM (iplant), go to TAIR10 genome, load an RNASeq data set, and right-click something in the data view. Choose the option "squish." BUT LATER THIS HAS CHANGED TO FOLLOWING IDEA : Implement a lock tier on tier glyph. IMPLEMENTATION DETAIL: A user would right click and select lock tier. This would lock the height of the tier. This means height of tier in number of pixels remains same. It should not be affected by max depth. When a user changes the max depth, the height remains constant but number of stack changes. |
| Status | Open [ 1 ] | Resolved [ 5 ] |
| Assignee | Alyssa Gulledge [ alyssa ] | |
| Resolution | Fixed [ 1 ] |
| Status | Resolved [ 5 ] | Closed [ 6 ] |
| Resolution | Fixed [ 1 ] | |
| Status | Closed [ 6 ] | Reopened [ 4 ] |
| Summary | implement squish | Lock track height function |
| Description |
THIS IS ORIGINAL IDEA OF DR. LORAINE As always, re-assign or not as you see fit. Implement a new interaction "squish," same functionality as IGV and UCSC Genome Browser "squish": We probably already have the basic functionality in place - this request mainly addresses the UI aspects. How it works from the user's perspective: User selects a track. User clicks a short-cut button "squish" or right-clicks a track label. "Squish" option is next to "collapsed" in right-click menu. When setting is checked, max expand goes to "unlimited" (0) but the track height stays the same. When setting is unchecked, max expand goes back to what it was previously and the track height stays the same. For demo in IGV, make a NGS Viewer VM (iplant), go to TAIR10 genome, load an RNASeq data set, and right-click something in the data view. Choose the option "squish." BUT LATER THIS HAS CHANGED TO FOLLOWING IDEA : Implement a lock tier on tier glyph. IMPLEMENTATION DETAIL: A user would right click and select lock tier. This would lock the height of the tier. This means height of tier in number of pixels remains same. It should not be affected by max depth. When a user changes the max depth, the height remains constant but number of stack changes. |
selects a track. open annotation tab and click on 'Lock...' in track height panel. This means lock the height of tier in number of pixels. When a user changes the stack height, the track height remains constant but number of stack inside the track changes. |
| Status | Reopened [ 4 ] | Closed [ 6 ] |
| Resolution | Fixed [ 1 ] |