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  1. Bug Repository
  2. BUG-59

Graph file errors

          Details

          • Type: Bug
          • Status: Closed (View Workflow)
          • Priority: Major
          • Resolution: Fixed
          • Labels:
            None

            Description

            Load Arabidopsis, A_thaliana_Jun_2009.
            Load graph files Bioviz(DAS/2)/AtTile1R/GSE9646/10h_ABA/GSM243689
            Verify that they do not permanently lock IGB if you load large sections.
            Zoom in and out, in both the x and y axis.
            Try to zoom while loading the second graph file in the folder.
            Report exceptions in the output
            Compare to version 6.3
            Sourceforge# 3073389 This partially fixes the bug, although it's still there.

            Test Results
            Sept 27, 2010 - Alyssa Gulledge

            version 6.3.1 (6959) Seems to be solid. I loaded the first large file completely (whole chromosome) zoomed in and out on both x and y axis. I checked the second graph file, and zoomed in both axes while it loaded region and then while it loaded whole chromosome. I repeated the zooming and moving whole loading the third graph file in the same folder. Major slow down in movemoent (expected) but no amount of moving, zooming or clicking seemed to disrupt the view. Graph(s) remained visible and unchanged the entire time.

              Attachments

                Issue Links

                is blocked by

                Task - A task that needs to be done. BUG-638 Graph files

                • Blocker - Blocks development and/or testing work, production could not run.
                • Closed

                  Activity

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                  afshan Afshan Jalali (Inactive) created issue -
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                  afshan Afshan Jalali (Inactive) added a comment -

                  version: 6.5 (7717)

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                  afshan Afshan Jalali (Inactive) added a comment - version: 6.5 (7717)
                  afshan Afshan Jalali (Inactive) made changes -
                  Field Original Value New Value
                  Status Open [ 1 ] Resolved [ 5 ]
                  Resolution Fixed [ 1 ]
                  alyssa Alyssa Gulledge (Inactive) made changes -
                  Status Resolved [ 5 ] Closed [ 6 ]
                  alyssa Alyssa Gulledge (Inactive) made changes -
                  Project IGB6.5 [ 10010 ] Bug Repository [ 10030 ]
                  Key IGB-37 BUG-59
                  alyssa Alyssa Gulledge (Inactive) made changes -
                  Resolution Fixed [ 1 ]
                  Status Closed [ 6 ] Reopened [ 4 ]
                  david David Norris (Inactive) made changes -
                  Assignee Afshan Jalali [ afshan ]
                  david David Norris (Inactive) made changes -
                  Status Reopened [ 4 ] Resolved [ 5 ]
                  Resolution Fixed [ 1 ]
                  david David Norris (Inactive) made changes -
                  Status Resolved [ 5 ] Closed [ 6 ]
                  alyssa Alyssa Gulledge (Inactive) made changes -
                  Resolution Fixed [ 1 ]
                  Status Closed [ 6 ] Reopened [ 4 ]
                  Assignee Anuj Puram [ anuj ]
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                  anuj Anuj Puram (Inactive) added a comment -

                  Passed version 6.7.0 (9791) on Mac

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                  anuj Anuj Puram (Inactive) added a comment - Passed version 6.7.0 (9791) on Mac
                  anuj Anuj Puram (Inactive) made changes -
                  Assignee Anuj Puram [ anuj ] Katharine Kubiak [ kkubiak ]
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                  kkubiak Katharine Kubiak (Inactive) added a comment -

                  Passed v9811 Windows

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                  kkubiak Katharine Kubiak (Inactive) added a comment - Passed v9811 Windows
                  kkubiak Katharine Kubiak (Inactive) made changes -
                  Assignee Katharine Kubiak [ kkubiak ] Alyssa Gulledge [ alyssa ]
                  alyssa Alyssa Gulledge (Inactive) made changes -
                  Status Reopened [ 4 ] Resolved [ 5 ]
                  Assignee Alyssa Gulledge [ alyssa ]
                  Resolution Fixed [ 1 ]
                  alyssa Alyssa Gulledge (Inactive) made changes -
                  Status Resolved [ 5 ] Closed [ 6 ]
                  smylapur Vineeth Mylapur (Inactive) made changes -
                  Resolution Fixed [ 1 ]
                  Status Closed [ 6 ] Reopened [ 4 ]
                  Assignee Vineeth Mylapur [ smylapur ]
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                  smylapur Vineeth Mylapur (Inactive) added a comment -

                  Passed 7.0(v1184) Windows

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                  smylapur Vineeth Mylapur (Inactive) added a comment - Passed 7.0(v1184) Windows
                  smylapur Vineeth Mylapur (Inactive) made changes -
                  Status Reopened [ 4 ] Resolved [ 5 ]
                  Assignee Vineeth Mylapur [ smylapur ]
                  Resolution Fixed [ 1 ]
                  richard Richard Linchangco (Inactive) made changes -
                  Resolution Fixed [ 1 ]
                  Status Resolved [ 5 ] Reopened [ 4 ]
                  alyssa Alyssa Gulledge (Inactive) made changes -
                  Link This issue is blocked by BUG-638 [ BUG-638 ]
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                  richard Richard Linchangco (Inactive) added a comment -

                  Passed V.13740, Mac, Java 1.6.0_33

                  "Small memory (1GB)" version of IGB used

                  Graph files loaded without any issues. IGB did not freeze during loading or zooming in or out.

                  Show
                  richard Richard Linchangco (Inactive) added a comment - Passed V.13740, Mac, Java 1.6.0_33 "Small memory (1GB)" version of IGB used Graph files loaded without any issues. IGB did not freeze during loading or zooming in or out.
                  richard Richard Linchangco (Inactive) made changes -
                  Status Reopened [ 4 ] Resolved [ 5 ]
                  Assignee Alyssa Gulledge [ alyssa ]
                  Resolution Fixed [ 1 ]
                  alyssa Alyssa Gulledge (Inactive) made changes -
                  Status Resolved [ 5 ] Closed [ 6 ]
                  Assignee Alyssa Gulledge [ alyssa ]

                    People

                    • Assignee:
                      Unassigned
                      Reporter:
                      afshan Afshan Jalali (Inactive)
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                      Dates

                      • Created:
                        Updated:
                        Resolved: