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  1. Bug Repository
  2. BUG-701

color Glyphs by RGB value in BED file

    Details

    • Type: Bug
    • Status: Closed (View Workflow)
    • Priority: Major
    • Resolution: Fixed
    • Labels:
      None

      Description

      Please re-assign (or not) as you see fit.

      This is a new feature request and I know it's getting late in the game. But if you could slip it in without risking too many bugs, I would appreciate it!

      BED file has "rgb" filed, which is comma-separated red, green, blue values.

      If a BED file contains data in this field, please color the corresponding Glyphs using the designated RGB values.

      All other Glyphs would be colored using the default colors or whatever is specified in annots.xml, if there is one.

      If user selects a track and uses the color swatches or change foreground command, then all the Glyphs should change to the new color. If user resets to default, then the original colors should be restored, determined by the RGB field in cases where that field was set.

      We need this to color-code annotation types. We have started updating Arabidopsis and rice gene models and want to use color to indicate revision status and types of revisions.

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            ann.loraine Ann Loraine created issue -
            hiralv Hiral Vora (Inactive) made changes -
            Field Original Value New Value
            Assignee Hiral Vora [ hiralv ] Alyssa Gulledge [ alyssa ]
            alyssa Alyssa Gulledge (Inactive) made changes -
            Assignee Alyssa Gulledge [ alyssa ] Ann Loraine [ aloraine ]
            ann.loraine Ann Loraine made changes -
            Assignee Ann Loraine [ aloraine ] Alyssa Gulledge [ alyssa ]
            alyssa Alyssa Gulledge (Inactive) made changes -
            Attachment colortest.bed [ 11805 ]
            alyssa Alyssa Gulledge (Inactive) made changes -
            Assignee Alyssa Gulledge [ alyssa ] Hiral Vora [ hiralv ]
            hiralv Hiral Vora (Inactive) made changes -
            Attachment colortest.bed [ 11807 ]
            hiralv Hiral Vora (Inactive) made changes -
            Assignee Hiral Vora [ hiralv ] Alyssa Gulledge [ alyssa ]
            alyssa Alyssa Gulledge (Inactive) made changes -
            Status Open [ 1 ] Resolved [ 5 ]
            Assignee Alyssa Gulledge [ alyssa ]
            Resolution Fixed [ 1 ]
            alyssa Alyssa Gulledge (Inactive) made changes -
            Status Resolved [ 5 ] Closed [ 6 ]
            alyssa Alyssa Gulledge (Inactive) made changes -
            Project IGB 7.0 [ 10140 ] Bug Repository [ 10030 ]
            Key IGBC-720 BUG-701
            Issue Type New Feature [ 2 ] Bug [ 1 ]
            alyssa Alyssa Gulledge (Inactive) made changes -
            Link This issue relates to BUG-622 [ BUG-622 ]

              People

              • Assignee:
                Unassigned
                Reporter:
                ann.loraine Ann Loraine
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                Dates

                • Created:
                  Updated:
                  Resolved: