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  1. Deep Backlog
  2. DB-135

plug-in that can convert "fa" format to 2bit

    Details

    • Type: Improvement
    • Status: Open (View Workflow)
    • Priority: Major
    • Resolution: Unresolved
    • Labels:
      None

      Description

      Create a plug-in to convert fasta format to 2bit:

      • User selects Tools > Convert fasta to 2bit...
      • Window opens (see attached)
      • User selects fasta file
      • User choose folder to save the 2bit file
      • User enters name (prefix) of 2bit file
      • User clicks "Convert" button
      • Plug-in reads fasta file, writes data in 2bit format
      • Plug-in prints status updates to a text area in the window.

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          Issue Links

            Activity

            ann.loraine Ann Loraine created issue -
            ann.loraine Ann Loraine made changes -
            Field Original Value New Value
            Rank Ranked higher
            ann.loraine Ann Loraine made changes -
            Epic Link IGBF-569 [ 15638 ]
            ann.loraine Ann Loraine made changes -
            Fix Version/s 8.4.1 Minor Release [ 10002 ]
            ann.loraine Ann Loraine made changes -
            Fix Version/s 8.4.1 Minor Release [ 10002 ]
            ann.loraine Ann Loraine made changes -
            Attachment FaToTwoBitConverter.png [ 13114 ]
            ann.loraine Ann Loraine made changes -
            Attachment FaToTwoBitConverter.png [ 13115 ]
            ann.loraine Ann Loraine made changes -
            Project IGB [ 10840 ] Deep Backlog [ 11041 ]
            Key IGBF-786 DB-135
            Workflow Loraine Lab Workflow [ 16089 ] jira [ 16842 ]
            mason Mason Meyer (Inactive) made changes -
            Link This issue relates to IGBF-1093 [ IGBF-1093 ]

              People

              • Assignee:
                tmall Tarun Mall (Inactive)
                Reporter:
                ann.loraine Ann Loraine
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                Dates

                • Created:
                  Updated: