New plug-in for IGB- questions about data selection

On Thu, Jun 28, 2018 at 5:11 AM, Adam Zaborowski <Zaborowski@mpimp-golm.mpg.de<Zaborowski@mpimp-golm.mpg.de>> wrote:
Dear Ann,

I would like to develop an application/plug-in for IGB. Because of that I have a few questions which I want to ask.

First, can I select a region/part of my data and get the location, or maybe even values for different lines, of it as an output? For example, I have peaks from ChIP-seq analysis and I want to know exact location/values of those which are selected in IGB.

Second, can I extract from IGB values for selected/all loaded lines for selected genomic region? For example, I have two tracks for ChIP-seq against two different transcription factors and I want to know what is their average score for selected region e.q. 1kb or 10kb. Can I have also information about which genes (mRNA) are present in this region or values for any other line?

I appreciate any help you can provide.

Your sincerely,
Adam Zaborowski

Adam Zaborowski
PhD student
Bioinformatics AG Walther
MPI of Molecular Plant Physiology
Am Muehlenberg 1
14476 Potsdam