Details
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Type:
Bug
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Status: Closed (View Workflow)
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Priority:
Blocker
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Resolution: Done
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Labels:
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Story Points:2
Description
Dear IGB developers,
I am working with SNP calls, and I cannot get the newest vcf formats to load, which are the standard output from SnpEff. The error I get is "file version not supported VCFv4.2"
Do you have plans to support VF4, and if not what do you recommend for being able to view my data. Should I just convert back to an earlier version of vcf?
Thanks
Alex
Reporter: Alexander R Leydon
E-mail: leydon.alexander@gmail.com
Attachments
Issue Links
- relates to
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IGBF-1380 Support newer VCF - User request
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- Closed
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Activity
| Story Points | 2 | |
| Priority | Blocker [ 1 ] |
| Assignee | Ann Loraine [ aloraine ] | Mason Meyer [ mason ] |
| Rank | Ranked higher |
| Workflow | Loraine Lab Workflow [ 18081 ] | Fall 2019 Workflow Update [ 20481 ] |
| Workflow | Fall 2019 Workflow Update [ 20481 ] | Revised Fall 2019 Workflow Update [ 22674 ] |
| Status | Open [ 1 ] | To-Do [ 10305 ] |
| Status | To-Do [ 10305 ] | In Progress [ 3 ] |
| Status | In Progress [ 3 ] | Needs 1st Level Review [ 10005 ] |
| Status | Needs 1st Level Review [ 10005 ] | First Level Review in Progress [ 10301 ] |
| Status | First Level Review in Progress [ 10301 ] | Ready for Pull Request [ 10304 ] |
| Status | Ready for Pull Request [ 10304 ] | Pull Request Submitted [ 10101 ] |
| Status | Pull Request Submitted [ 10101 ] | Reviewing Pull Request [ 10303 ] |
| Status | Reviewing Pull Request [ 10303 ] | Merged Needs Testing [ 10002 ] |
| Status | Merged Needs Testing [ 10002 ] | Post-merge Testing In Progress [ 10003 ] |
| Resolution | Done [ 10000 ] | |
| Status | Post-merge Testing In Progress [ 10003 ] | Closed [ 6 ] |