Details
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Type:
Support
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Status: Closed (View Workflow)
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Priority:
Major
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Resolution: Done
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Labels:None
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Sprint:Sprint 4, Sprint 5
Description
From: "Dingwall, Andrew" <Adingwall@luc.edu>
Date: Mon, 23 Jun 2014 16:47:34 +0000
To: Ann Loraine <aloraine@uncc.edu>
Subject: current genome annotations
Hi Ann,
The IGB version I have been using defaults to the Drosophila melanogaster genome annotation dated 2006. There is a current annotation that is more recent, though I don’t know how to used that one. (The current release of FlyBase (FB2014_03) contains annotation release version 5.57 of D. melanogaster, which will be the last version of the 5.x assembly. Starting with FB2014_04, Flybase is migrating to release 6 of the BDGP assembly).
Is there a simple way to display our ChIP-seq and RNA-seq data on the current genome annotation?
Thanks…
Andrew
Andrew K. Dingwall, PhD
Loyola University Chicago, Health Sciences Division
Stritch School of Medicine
Oncology Research Institute/Gene Regulation and Epigenetics Program
Departments of Pathology and Microbiology & Immunology
2160 S. First Avenue, Cancer Center-334
Maywood, IL 60153
(708) 327-3141; fax (708) 327-3342
Website: http://dingwall-lab.weebly.com/
Attachments
Issue Links
- is duplicated by
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HELP-80
User Support: User requests D. melanogaster (release 6) genome
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- Closed
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