Tarun Santosh (Inactive) added a comment - 25/Nov/13 11:57 AM Passed v15841 Mac

Kyle Suttlemyre (Inactive) added a comment - 19/Feb/14 1:13 PM Instead of updating/testing urls manually attempt to make google work for us for the phytozome links create google links in the form of http://www.google.com/search?&sourceid=navclient&btnI=I&q=site%3Aphytozome.net%20 <ID> What this url does is uses google to do a site specific search on phytozome.net for the specific <ID> and then do an "I'm feeling lucky" redirect to the top results Resource: http://webapps.stackexchange.com/questions/53554/googles-im-feeling-lucky-url

Ann Loraine added a comment - 26/Mar/14 11:48 PM Please test web links after Ann's pull request is added to development branch.

Ann Loraine added a comment - 31/Mar/14 9:49 AM Only need to test linkouts from QuickLoad genome versions. Any track with track name containing the string "mRNA" or "EST" should link out to NCBI. Ex) http://www.ncbi.nlm.nih.gov/nuccore/HQ318070 is the linkout from an m RNA record with id HQ318070.

Mason Meyer (Inactive) added a comment - 27/Jun/14 10:05 AM - edited *Recommendations from this testing for more accurate search results: 1) We should add the description and species to the Gene ID in the Google search. 2) We should convert underscores to spaces for Google search. A_gambiae_Feb_2003/ -EnsGene: Google -mRNA: Google NCBI -EST: Google NCBI A_lyrata_Apr_2011/ -Phytozome v7: Google (irrelevant search) A_melanoleuca_Dec_2009/ -EnsGene: Google -mRNA: Google NCBI -EST: Google NCBI A_mellifera_Jan_2005/ -RefGene: Google *Ex: AmeLGUn_WGA742_2.501998.501998.m (from Richard Linchancgo's testing) *The underscores should actually be converted to spaces for Google NCBI (inconsistent behavior; several broken links) -mRNA: Google NCBI -EST: Google NCBI A_thaliana_Apr_2008/ -TAIR8 mRNA: Google TAIR -TAIR8 tRNA: Google TAIR -TAIR8 miRNA: Google TAIR -TAIR8 ncRNA: Google TAIR -TAIR8 snRNA: Google TAIR -TAIR8 snoRNA: Google TAIR -TAIR8 rRNA: Google TAIR A_thaliana_Jan_2004/ -TAIR7 Protein-coding: Google TAIR -TAIR7 miRNA: Google TAIR -TAIR7 rRNA: Google TAIR -TAIR7 tRNA: Google TAIR -TAIR7 other RNA: Google TAIR -TAIR7 snoRNA: Google TAIR -TAIR7 pseudogenes: Google TAIR -TAIR7 snRNAs: Google TAIR A_thaliana_Jun_2009/ -TDNA insertion lines: Google -Affymetrix: ATH1 probe sets: Google AG probe sets: Google -TAIR 10 mRNA: Google TAIR -TAIR10 other annotations: -All Genes: Google TAIR -Transposable Elements: Google -TE Genes: Google TAIR -miRNA genes: Google TAIR -ncRNA genes: Google TAIR -pseudogenes: Google TAIR -rRNA genes: Google TAIR -tRNA genes: Google TAIR -snRNA genes: Google TAIR -EST: NCBI EST (single-mapping): Google NCBI EST (multi-mapping): Google -TAIR9: -TAIR9 All: Google TAIR -TAIR9 mRNA: Google TAIR -TAIR9 TE gene: Google TAIR -TAIR9 tRNA: Google TAIR -TAIR9 rRNA: Google TAIR -TAIR9 miRNA: Google TAIR -TAIR9 snoRNA: Google TAIR -TAIR9 snRNA: Google TAIR -TAIR9 ncRNA: Google TAIR B_distachyon_Aug_2010/ -Phytozome v7: Google B_taurus_Oct_2011/ -RefGene: Google NCBI -mRNA: Google NCBI -EST: Google NCBI C_albicans_SC5314_Nov_2008/ -Candidagenome.org: Google C_albicans_WO-1_Jul_2010/ (Genome Sequence exists, but no annotations; NOT an error) C_elegans_May_2008/ -RefSeq Genes: Google -WormBase Genes: Google -WormBase PseudoGenes: Google C_elegans_Oct_2010/ -RefGene: Google NCBI -mRNA: Google NCBI -EST: Google NCBI C_papaya_Aug_2010/ -Phytozome v7: Google C_porcellus_Feb_2008/ -RefGene: Google NCBI -mRNA: Google NCBI -EST: Google NCBI C_reinhardtii_Nov_2010/ -Phytozome v7: Google D_discoideum_Ax4_May_2009/ -All: DictyBase Google -Gene predictions: DictyBase Google -Curated genes (July 2010): DictyBase Google -Geneid re-predictions: DictyBase Google -tRNAs from tRNAscan-SE: DictyBase Google -ncRNAs: DictyBase Google -ncRNAs (Genbank): DictyBase Google D_melanogaster_Apr_2006/ -RefGene: Google NCBI -mRNA: Google NCBI -EST: Google NCBI D_rerio_Jul_2010/ -RefGene: Google NCBI -mRNA: Google NCBI -EST: Google NCBI E_caballus_Sep_2007/ -RefGene: Google NCBI -mRNA: Google (No results) NCBI (strange since Google could not find the page; maybe Google has not yet indexed NCBI page) -EST: Google NCBI E_coli_K12-MG1655_Jan_2012/ -Genbank Complete Record: Google F_catus_Dec_2008/ -RefGene: Google NCBI -mRNA: Google NCBI -EST: Google NCBI F_catus_Sep_2011/ -RefGene: Google NCBI -mRNA: Google NCBI -EST: Google NCBI F_vesca_Sep_2011/ -Gene predictions: Google G_gallus_Nov_2011/ -RefGene: Google NCBI -mRNA: Google NCBI -EST: Google NCBI G_max_Aug_2010/ -Phytozome: Google H_sapiens_Dec_2013/ -Cytobands: Google -RefGene: Google NCBI -mRNA: Google NCBI -EST: Google NCBI H_sapiens_Feb_2009/ -Cytobands: Google -RefGene: Google NCBI -mRNA: Google NCBI -EST: Google NCBI H_sapiens_Mar_2006/ -Cytobands: Google -RefGene: Google NCBI H_sapiens_May_2004/ -Cytobands: Google -RefGene: Google NCBI L_africana_Jul_2009/ -EnsGene: Google -mRNA: Google NCBI M_domestica_Oct_2006/ -RefGene: Google NCBI -mRNA: Google NCBI -EST: Google NCBI M_musculus_Dec_2011/ -RefGene: Google NCBI -mRNA: Google NCBI -EST: Google NCBI M_musculus_Jul_2007/ -RefGene: Google NCBI -mRNA: Google NCBI -EST: Google NCBI M_truncatula_Mar_2009/ -Phytozome v7: Google N_vectensis_Jun_2007/ -Gene models: Google (irrelevant search) O_aries_Feb_2010/ -RefGene: Google NCBI -mRNA: Google NCBI -EST: Google NCBI O_sativa_japonica_Jun_2009/ -Phytozome v7: Google O_sativa_japonica_Oct_2011/ -RGAP (MSU7): Google -RAP-DB: Google P_patens_Jan_2008/ -CosMoss Gene Models, v1.6: Google P_persica_Apr_2010/ -Phytozome v7: Google P_trichocarpa_Aug_2012/ -Phytozome: Google P_trichocarpa_Jan_2010/ -Phytozome v7: Google P_troglodytes_Oct_2010/ -RefGene: Google NCBI -mRNA: Google NCBI -EST: Google NCBI R_communis_May_2008/ -Phtyozome v7: Google R_norvegicus_Mar_2012/ -RefGene: Google NCBI -mRNA: Google NCBI -EST: Google NCBI S_bicolor_Jan_2009/ -Phytozome v7: Google S_cerevisiae_Apr_2011/ -Genes: Google SGD S_lycopersicum_Feb_2014/ -ITAG2.4: Google S_lycopersicum_May_2012/ -ITAG2.3: Google S_pombe_May_2012/ -Reference genes: Google T_castaneum_Mar_2008/ -Reference genes: Google -Scaffold Regions: Google T_kodakaraensis_KOD1_May_2004/ -Gene: Google T_parvula_May_2012/ -FGenesh++: Google T_rubripes_Oct_2011/ -RefGene: Google NCBI -mRNA: Google NCBI -EST: Google NCBI V_carteri_Jul_2010/ -Phytozome v7: Google (irrelevant search) V_vinifera_Mar_2010/ -Phytozome v7: Google X_tropicalis_Nov_2009/ -RefGene: Google NCBI -mRNA: Google NCBI -EST: Google NCBI Z_mays_B73_Mar_2010/ -Maize Transcripts 5b release: Google MaizeSequence.org