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  1. IGB
  2. IGBF-1189

Add S. Cerevisiae June 2008 genome to IGB Quickload - User request

        Details

        • Type: Task
        • Status: Closed (View Workflow)
        • Priority: Major
        • Resolution: Done
        • Affects Version/s: None
        • Fix Version/s: None
        • Labels:
        • Story Points:
          0.5
        • Sprint:
          Fall 2018 1, Fall 2018 Sprint 2, Fall 2018 Sprint 3

          Description

          A user from HELP-279 has contacted us about the June 2008 S. Cerevisiae genome missing from IGB Quickload.

          To aid in the task of adding this genome, I have attached the:

          1) 2bit reference genome, obtained here:
          http://hgdownload.soe.ucsc.edu/goldenPath/sacCer2/bigZips/

          2) Reference Annotations in BED format, obtained from the UCSC Table Browser using the "SGD Gene" track

            Attachments

              Issue Links

              relates to

              Task - A task that needs to be done. IGBF-1414 Check that 2008 yeast genome synonyms are in species.txt and synonyms.txt

              • Critical - Crashes, loss of data, severe memory leak.
              • Closed

              Bug - A problem which impairs or prevents the functions of the product. HELP-279 S. cerevisiae Jun_2008 reference genome not loading

              • Closed

                Activity

                  People

                  • Assignee:
                    ieclabau Ivory Blakley (Inactive)
                    Reporter:
                    mason Mason Meyer (Inactive)
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                    Dates

                    • Created:
                      Updated:
                      Resolved: