Uploaded image for project: 'IGB'
  1. IGB
  2. IGBF-1217

add Genome in a Bottle data sets to IGB Quickload

        Details

        • Story Points:
          2
        • Epic Link:
        • Sprint:
          Fall 4 Oct 26 - Nov 6, Fall 5 Nov 9 - Nov 20, Fall 6 Nov 30 - Dec 11, Fall 7 Dec 14 - Dec 23

          Description

          This is a suggestion from Dr. Steve Chervitz of Personalis in Menlo Park.

            Attachments

              Issue Links

              is blocked by

              Task - A task that needs to be done. IGBF-2589 Fix ftp quickload

              • Major - Major loss of function.
              • Closed
              relates to

              Task - A task that needs to be done. IGBF-3125 Deploy human trackhub metadata on bitbucket

              • Major - Major loss of function.
              • Closed

              Improvement - An improvement or enhancement to an existing feature or task. IGBF-2761 Update GIAB annots.xml to point to S3

              • Major - Major loss of function.
              • Closed

              Updated Genome - After a genome has been updated and committed to SVN IGBF-2696 Add blacklist regions to IGB quickload for mouse, human, fruit fly

              • Major - Major loss of function.
              • Closed

                Activity

                Ascending order - Click to sort in descending order
                ann.loraine Ann Loraine created issue -
                ann.loraine Ann Loraine made changes -
                Field Original Value New Value
                Workflow Loraine Lab Workflow [ 17899 ] Fall 2019 Workflow Update [ 18835 ]
                ann.loraine Ann Loraine made changes -
                Workflow Fall 2019 Workflow Update [ 18835 ] Revised Fall 2019 Workflow Update [ 20960 ]
                Status Open [ 1 ] To-Do [ 10305 ]
                nfreese Nowlan Freese made changes -
                Assignee Nowlan Freese [ nfreese ]
                nfreese Nowlan Freese made changes -
                Story Points 5 2
                ann.loraine Ann Loraine made changes -
                Epic Link IGBF-1765 [ 17855 ]
                ann.loraine Ann Loraine made changes -
                Sprint Fall 4 Oct 26 - Nov 6 [ 107 ]
                nfreese Nowlan Freese made changes -
                Status To-Do [ 10305 ] In Progress [ 3 ]
                ann.loraine Ann Loraine made changes -
                Rank Ranked higher
                ann.loraine Ann Loraine made changes -
                Sprint Fall 4 Oct 26 - Nov 6 [ 107 ] Fall 4 Oct 26 - Nov 6, Fall 5 Nov 9 - Nov 20 [ 107, 108 ]
                ann.loraine Ann Loraine made changes -
                Rank Ranked higher
                nfreese Nowlan Freese made changes -
                Status In Progress [ 3 ] To-Do [ 10305 ]
                nfreese Nowlan Freese made changes -
                Link This issue relates to IGBF-2589 [ IGBF-2589 ]
                nfreese Nowlan Freese made changes -
                Link This issue is blocked by IGBF-2589 [ IGBF-2589 ]
                nfreese Nowlan Freese made changes -
                Link This issue relates to IGBF-2589 [ IGBF-2589 ]
                nfreese Nowlan Freese made changes -
                Status To-Do [ 10305 ] In Progress [ 3 ]
                nfreese Nowlan Freese made changes -
                Status In Progress [ 3 ] To-Do [ 10305 ]
                ann.loraine Ann Loraine made changes -
                Sprint Fall 4 Oct 26 - Nov 6, Fall 5 Nov 9 - Nov 20 [ 107, 108 ] Fall 4 Oct 26 - Nov 6, Fall 5 Nov 9 - Nov 20, Fall 6 Nov 23 - Dec 4 [ 107, 108, 109 ]
                ann.loraine Ann Loraine made changes -
                Rank Ranked higher
                nfreese Nowlan Freese made changes -
                Status To-Do [ 10305 ] In Progress [ 3 ]
                nfreese Nowlan Freese made changes -
                Attachment 1217.zip [ 14996 ]
                nfreese Nowlan Freese made changes -
                Assignee Nowlan Freese [ nfreese ]
                nfreese Nowlan Freese made changes -
                Status In Progress [ 3 ] Needs 1st Level Review [ 10005 ]
                chirag24 Chirag Chandrahas Shetty (Inactive) made changes -
                Assignee Chirag Chandrahas Shetty [ chirag24 ]
                ann.loraine Ann Loraine made changes -
                Sprint Fall 4 Oct 26 - Nov 6, Fall 5 Nov 9 - Nov 20, Fall 6 Nov 30 - Dec 11 [ 107, 108, 109 ] Fall 4 Oct 26 - Nov 6, Fall 5 Nov 9 - Nov 20, Fall 6 Nov 30 - Dec 11, Fall 7 Dec 14 - Dec 23 [ 107, 108, 109, 110 ]
                ann.loraine Ann Loraine made changes -
                Rank Ranked higher
                chirag24 Chirag Chandrahas Shetty (Inactive) made changes -
                Assignee Chirag Chandrahas Shetty [ chirag24 ] Nowlan Freese [ nfreese ]
                chirag24 Chirag Chandrahas Shetty (Inactive) made changes -
                Status Needs 1st Level Review [ 10005 ] First Level Review in Progress [ 10301 ]
                chirag24 Chirag Chandrahas Shetty (Inactive) made changes -
                Status First Level Review in Progress [ 10301 ] To-Do [ 10305 ]
                nfreese Nowlan Freese made changes -
                Status To-Do [ 10305 ] In Progress [ 3 ]
                nfreese Nowlan Freese made changes -
                Attachment 1217.zip [ 14996 ]
                nfreese Nowlan Freese made changes -
                Attachment 1217.zip [ 15050 ]
                nfreese Nowlan Freese made changes -
                Attachment igbDefaultPrefs.json [ 15051 ]
                nfreese Nowlan Freese made changes -
                Assignee Nowlan Freese [ nfreese ] Ann Loraine [ aloraine ]
                nfreese Nowlan Freese made changes -
                Status In Progress [ 3 ] Needs 1st Level Review [ 10005 ]
                ann.loraine Ann Loraine made changes -
                Assignee Ann Loraine [ aloraine ] Nowlan Freese [ nfreese ]
                ann.loraine Ann Loraine made changes -
                Status Needs 1st Level Review [ 10005 ] First Level Review in Progress [ 10301 ]
                ann.loraine Ann Loraine made changes -
                Status First Level Review in Progress [ 10301 ] To-Do [ 10305 ]
                nfreese Nowlan Freese made changes -
                Attachment igbDefaultPrefs.json [ 15051 ]
                nfreese Nowlan Freese made changes -
                Attachment igbDefaultPrefs.json [ 15052 ]
                nfreese Nowlan Freese made changes -
                Assignee Nowlan Freese [ nfreese ] Ann Loraine [ aloraine ]
                nfreese Nowlan Freese made changes -
                Status To-Do [ 10305 ] In Progress [ 3 ]
                nfreese Nowlan Freese made changes -
                Status In Progress [ 3 ] Needs 1st Level Review [ 10005 ]
                nfreese Nowlan Freese made changes -
                Attachment igbDefaultPrefs.json [ 15052 ]
                nfreese Nowlan Freese made changes -
                Attachment igbDefaultPrefs.json [ 15054 ]
                nfreese Nowlan Freese made changes -
                Attachment igbDefaultPrefs.json [ 15054 ]
                nfreese Nowlan Freese made changes -
                Attachment igbDefaultPrefs.json [ 15056 ]
                nfreese Nowlan Freese made changes -
                Status Needs 1st Level Review [ 10005 ] First Level Review in Progress [ 10301 ]
                nfreese Nowlan Freese made changes -
                Status First Level Review in Progress [ 10301 ] Ready for Pull Request [ 10304 ]
                nfreese Nowlan Freese made changes -
                Status Ready for Pull Request [ 10304 ] Pull Request Submitted [ 10101 ]
                ann.loraine Ann Loraine made changes -
                Status Pull Request Submitted [ 10101 ] Reviewing Pull Request [ 10303 ]
                ann.loraine Ann Loraine made changes -
                Status Reviewing Pull Request [ 10303 ] Merged Needs Testing [ 10002 ]
                ann.loraine Ann Loraine made changes -
                Status Merged Needs Testing [ 10002 ] Post-merge Testing In Progress [ 10003 ]
                ann.loraine Ann Loraine made changes -
                Resolution Done [ 10000 ]
                Status Post-merge Testing In Progress [ 10003 ] Closed [ 6 ]
                ann.loraine Ann Loraine made changes -
                Assignee Ann Loraine [ aloraine ] Nowlan Freese [ nfreese ]
                ann.loraine Ann Loraine made changes -
                Link This issue relates to IGBF-2696 [ IGBF-2696 ]
                nfreese Nowlan Freese made changes -
                Fix Version/s 9.1.8 Major Release [ 10605 ]
                nfreese Nowlan Freese made changes -
                Link This issue relates to IGBF-2761 [ IGBF-2761 ]
                nfreese Nowlan Freese made changes -
                Link This issue relates to IGBF-3125 [ IGBF-3125 ]

                  People

                  • Assignee:
                    nfreese Nowlan Freese
                    Reporter:
                    ann.loraine Ann Loraine
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                    Dates

                    • Created:
                      Updated:
                      Resolved: