Details
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Type:
Task
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Status: Closed (View Workflow)
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Priority:
Critical
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Resolution: Done
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Affects Version/s: None
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Fix Version/s: 9.0.2 Minor Release
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Labels:
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Story Points:0.5
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Sprint:Summer 2018 Part 2
Description
An IGB App developer asks:
"Can I select a region/part of my data and get the location, or maybe even values for different lines, of it as an output? For example, I have peaks from ChIP-seq analysis and I want to know exact location/values of those which are selected in IGB."
Investigate how this could be done and add comments here.
- How does an App find out what items are currently selected in IGB?
- How does an App gain access to attributes of the currently selected items?
Tips:
- Look at how ProtAnnot does it.
- Look at Development plug-ins that perform operations on single annotation Glyph objects
- Look at IgbService
- Look at how API services are implemented in general
Attachments
Issue Links
- relates to
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IGBF-1355 Make a new IGB "demo" App that shows how Apps can get access to track data
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- Closed
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Activity
| Field | Original Value | New Value |
|---|---|---|
| Assignee | Ann Loraine [ aloraine ] |
| Summary | how does an App get access to currently selected items in IGB | Document how Apps get access to currently selected items in IGB |
| Rank | Ranked higher |
| Description |
An IGB App developer asks:
"Can I select a region/part of my data and get the location, or maybe even values for different lines, of it as an output? For example, I have peaks from ChIP-seq analysis and I want to know exact location/values of those which are selected in IGB." Investigate how this could be done and add comments here. * How does an App find out what items are currently selected in IGB? * How does an App gain access to attributes of the currently selected items? |
An IGB App developer asks:
"Can I select a region/part of my data and get the location, or maybe even values for different lines, of it as an output? For example, I have peaks from ChIP-seq analysis and I want to know exact location/values of those which are selected in IGB." Investigate how this could be done and add comments here. * How does an App find out what items are currently selected in IGB? * How does an App gain access to attributes of the currently selected items? Tips: * Look at how ProtAnnot does it. * Look at Development plug-ins that perform operations on single annotation Glyph objects |
| Description |
An IGB App developer asks:
"Can I select a region/part of my data and get the location, or maybe even values for different lines, of it as an output? For example, I have peaks from ChIP-seq analysis and I want to know exact location/values of those which are selected in IGB." Investigate how this could be done and add comments here. * How does an App find out what items are currently selected in IGB? * How does an App gain access to attributes of the currently selected items? Tips: * Look at how ProtAnnot does it. * Look at Development plug-ins that perform operations on single annotation Glyph objects |
An IGB App developer asks:
"Can I select a region/part of my data and get the location, or maybe even values for different lines, of it as an output? For example, I have peaks from ChIP-seq analysis and I want to know exact location/values of those which are selected in IGB." Investigate how this could be done and add comments here. * How does an App find out what items are currently selected in IGB? * How does an App gain access to attributes of the currently selected items? Tips: * Look at how ProtAnnot does it. * Look at Development plug-ins that perform operations on single annotation Glyph objects * Look at IgbService * Look at how API services are implemented in general |
| Rank | Ranked higher |
| Assignee | Ivory Blakley [ ieclabau ] |
| Rank | Ranked higher |
| Status | Open [ 1 ] | In Progress [ 3 ] |
| Status | In Progress [ 3 ] | Needs 1st Level Review [ 10005 ] |
| Assignee | Ivory Blakley [ ieclabau ] |
| Assignee | Anh Moss [ aduong ] |
| Assignee | Anh Moss [ aduong ] | Ivory Blakley [ ieclabau ] |
| Assignee | Ivory Blakley [ ieclabau ] |
| Assignee | Anh Moss [ aduong ] |
| Status | Needs 1st Level Review [ 10005 ] | Reviewing [ 10301 ] |
| Status | Reviewing [ 10301 ] | Ready for Pull Request [ 10304 ] |
| Assignee | Anh Moss [ aduong ] |
| Resolution | Done [ 10000 ] | |
| Status | Ready for Pull Request [ 10304 ] | Closed [ 6 ] |
| Assignee | Ivory Blakley [ ieclabau ] |
| Workflow | Loraine Lab Workflow [ 18043 ] | Fall 2019 Workflow Update [ 19918 ] |
| Workflow | Fall 2019 Workflow Update [ 19918 ] | Revised Fall 2019 Workflow Update [ 22037 ] |