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  1. IGB
  2. IGBF-1404

Restore GNC and Ecker ChIP-Seq data

        Details

        • Story Points:
          1
        • Sprint:
          Fall 2018 Sprint 2, Fall 2018 Sprint 3

          Description

          Identify GNC & Ecker data sets on HPC cluster and deploy to new ChIP-Seq data repository.

          Note: data may still be available on old transvar Andrew File System previously hosted in DHMRI server room. Data may also be available on transvar VM Blanchard set up following loss of DHMRI server room. Consult with Steven Blanchard to obtain backups, if they exist.

          When complete, be sure to update basecamp project(s) about where to find data.

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              Issue Links

              relates to

              Improvement - An improvement or enhancement to an existing feature or task. IGBF-1403 Add DNA-Seq and ChIP-Seq Quickload sources

              • Major - Major loss of function.
              • Closed

                Activity

                Ascending order - Click to sort in descending order
                ann.loraine Ann Loraine created issue -
                ann.loraine Ann Loraine made changes -
                Field Original Value New Value
                Link This issue relates to IGBF-1403 [ IGBF-1403 ]
                ann.loraine Ann Loraine made changes -
                Rank Ranked higher
                ann.loraine Ann Loraine made changes -
                Description Identify GCN & Ecker data sets on HPC cluster and deploy to new ChIP-Seq data repository.

                Note: data may still be available on old transvar systems previously hosted in DHMRI server room. Consult with Steven Blanchard to obtain backups, if they exist.                 		Identify GCN & Ecker data sets on HPC cluster and deploy to new ChIP-Seq data repository.

                Note: data may still be available on old transvar Andrew File System previously hosted in DHMRI server room. Consult with Steven Blanchard to obtain backups, if they exist. Data may also be available on transvar VM Blanchard set up following loss of DHMRI server room.
                ann.loraine Ann Loraine made changes -
                Description Identify GCN & Ecker data sets on HPC cluster and deploy to new ChIP-Seq data repository.

                Note: data may still be available on old transvar Andrew File System previously hosted in DHMRI server room. Consult with Steven Blanchard to obtain backups, if they exist. Data may also be available on transvar VM Blanchard set up following loss of DHMRI server room.                 		Identify GCN & Ecker data sets on HPC cluster and deploy to new ChIP-Seq data repository.

                Note: data may still be available on old transvar Andrew File System previously hosted in DHMRI server room. Data may also be available on transvar VM Blanchard set up following loss of DHMRI server room. Consult with Steven Blanchard to obtain backups, if they exist.
                ieclabau Ivory Blakley (Inactive) made changes -
                Summary Restore GCN and Ecker ChIP-Seq data Restore GNC and Ecker ChIP-Seq data
                ieclabau Ivory Blakley (Inactive) made changes -
                Description Identify GCN & Ecker data sets on HPC cluster and deploy to new ChIP-Seq data repository.

                Note: data may still be available on old transvar Andrew File System previously hosted in DHMRI server room. Data may also be available on transvar VM Blanchard set up following loss of DHMRI server room. Consult with Steven Blanchard to obtain backups, if they exist.                 		Identify GNC & Ecker data sets on HPC cluster and deploy to new ChIP-Seq data repository.

                Note: data may still be available on old transvar Andrew File System previously hosted in DHMRI server room. Data may also be available on transvar VM Blanchard set up following loss of DHMRI server room. Consult with Steven Blanchard to obtain backups, if they exist.
                ieclabau Ivory Blakley (Inactive) made changes -
                Sprint Fall 2018 Sprint 2 [ 52 ]
                ieclabau Ivory Blakley (Inactive) made changes -
                Rank Ranked lower
                ieclabau Ivory Blakley (Inactive) made changes -
                Status Open [ 1 ] In Progress [ 3 ]
                ieclabau Ivory Blakley (Inactive) made changes -
                Description Identify GNC & Ecker data sets on HPC cluster and deploy to new ChIP-Seq data repository.

                Note: data may still be available on old transvar Andrew File System previously hosted in DHMRI server room. Data may also be available on transvar VM Blanchard set up following loss of DHMRI server room. Consult with Steven Blanchard to obtain backups, if they exist.                 		Identify GNC & Ecker data sets on HPC cluster and deploy to new ChIP-Seq data repository.

                Note: data may still be available on old transvar Andrew File System previously hosted in DHMRI server room. Data may also be available on transvar VM Blanchard set up following loss of DHMRI server room. Consult with Steven Blanchard to obtain backups, if they exist.

                When complete, be sure to update basecamp project(s) about where to find data.
                ann.loraine Ann Loraine made changes -
                Assignee Ivory Blakley [ ieclabau ]
                ann.loraine Ann Loraine made changes -
                Assignee Ivory Blakley [ ieclabau ]
                ann.loraine Ann Loraine made changes -
                Rank Ranked higher
                ann.loraine Ann Loraine made changes -
                Sprint Fall 2018 Sprint 2 [ 52 ] Fall 2018 Sprint 2, Fall 2018 Sprint 3 [ 52, 53 ]
                ieclabau Ivory Blakley (Inactive) made changes -
                Status In Progress [ 3 ] Needs 1st Level Review [ 10005 ]
                ann.loraine Ann Loraine made changes -
                Status Needs 1st Level Review [ 10005 ] Needs Testing [ 10002 ]
                ann.loraine Ann Loraine made changes -
                Assignee Ivory Blakley [ ieclabau ]
                ann.loraine Ann Loraine made changes -
                Rank Ranked higher
                ann.loraine Ann Loraine made changes -
                Assignee Sneha Ramesh Watharkar [ jdaly ]
                ann.loraine Ann Loraine made changes -
                Assignee Sneha Ramesh Watharkar [ jdaly ]
                ptambvek Pranav Sanjay Tambvekar (Inactive) made changes -
                Status Needs Testing [ 10002 ] Testing In Progress [ 10003 ]
                ptambvek Pranav Sanjay Tambvekar (Inactive) made changes -
                Assignee Pranav Sanjay Tambvekar [ ptambvek ]
                ptambvek Pranav Sanjay Tambvekar (Inactive) made changes -
                Status Testing In Progress [ 10003 ] Open [ 1 ]
                ptambvek Pranav Sanjay Tambvekar (Inactive) made changes -
                Assignee Pranav Sanjay Tambvekar [ ptambvek ] Ann Loraine [ aloraine ]
                ann.loraine Ann Loraine made changes -
                Status Open [ 1 ] Reviewing Pull Request [ 10303 ]
                ann.loraine Ann Loraine made changes -
                Resolution Done [ 10000 ]
                Status Reviewing Pull Request [ 10303 ] Closed [ 6 ]
                ann.loraine Ann Loraine made changes -
                Workflow Loraine Lab Workflow [ 18109 ] Fall 2019 Workflow Update [ 19944 ]
                ann.loraine Ann Loraine made changes -
                Workflow Fall 2019 Workflow Update [ 19944 ] Revised Fall 2019 Workflow Update [ 22064 ]

                  People

                  • Assignee:
                    ann.loraine Ann Loraine
                    Reporter:
                    ann.loraine Ann Loraine
                  • Votes:
                    0 Vote for this issue
                    Watchers:
                    3 Start watching this issue

                    Dates

                    • Created:
                      Updated:
                      Resolved: