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  1. IGB
  2. IGBF-1416

Set up subversion repository on EC2 using EBS

        Details

        • Type: Task
        • Status: Closed (View Workflow)
        • Priority: Blocker
        • Resolution: Done
        • Affects Version/s: None
        • Fix Version/s: None
        • Labels:

          Description

          Set up and configure subversion repository to host Quickload foundational data sets.

          • Use detachable EBS volume to house data
          • Use micro EC2 instances to host Web server, subversion - svn.bioviz.org
          • Install software to let users explore & search repository using a Web browser
          • Support SSL (https)
          • Document configuration
          • Test that EBS can be re-mounted onto another EC2 and everything will still work
          • Set up permanent IP for svn.bioviz.org
          • Deploy data onto site for testing in IGB

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              ann.loraine Ann Loraine added a comment -

              EC2 and EBS volumes now set up.

              Note: within UNC Charlotte network svn.bioviz.org is invisible. To access, must use AWS address. However, the certificates are for Bioviz domain. Web browser will complain if you try to visit using Amazon address.

              Set up viewvc for browsing:

              To checkout quickload data quickload, read-only (no pushes to repo allowed):

              svn co --username=guest --password=guest co https://svn.bioviz.org/repos/genomes/quickload

              Documentation is in private Google Doc (Dr. Loraine's account)

              Show
              ann.loraine Ann Loraine added a comment - EC2 and EBS volumes now set up. Note: within UNC Charlotte network svn.bioviz.org is invisible. To access, must use AWS address. However, the certificates are for Bioviz domain. Web browser will complain if you try to visit using Amazon address. Set up viewvc for browsing: https://svn.bioviz.org/viewvc http://ec2-34-199-133-241.compute-1.amazonaws.com/viewvc To checkout quickload data quickload, read-only (no pushes to repo allowed): svn co --username=guest --password=guest co https://svn.bioviz.org/repos/genomes/quickload Documentation is in private Google Doc (Dr. Loraine's account)
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              ann.loraine Ann Loraine added a comment - - edited

              New subversion version-controlled Quickload is now deployed as http://igbquickload.org/quickload

              (same URL as before)

              To test:

              • Check that files can be loaded from a couple test genomes - Arabidopsis, human (UCSC data sets)
              • Check console for errors, compare with errors (if any) observed when only http://igbquickload.org/quickload/ is active
              Show
              ann.loraine Ann Loraine added a comment - - edited New subversion version-controlled Quickload is now deployed as http://igbquickload.org/quickload (same URL as before) To test: Check that files can be loaded from a couple test genomes - Arabidopsis, human (UCSC data sets) Check console for errors, compare with errors (if any) observed when only http://igbquickload.org/quickload/ is active

                People

                • Assignee:
                  ann.loraine Ann Loraine
                  Reporter:
                  ann.loraine Ann Loraine
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                  • Created:
                    Updated:
                    Resolved: