Details
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Type:
Bug
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Status: Closed (View Workflow)
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Priority:
Minor
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Resolution: Done
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Affects Version/s: None
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Fix Version/s: None
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Labels:
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Story Points:1
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Epic Link:
Description
File > Open Genome from file... > Choose Reference File.
The allowed reference files extension are 2bit, bnib, fa, fas, fasta, fna, fsa, mpfa, fa.gz, fas.gz, fasta.gz, fna.gz, fsa.gz and mpfa.gz.
For windows it is working as expected by not allowing selection of any file other than above mention extensions.
But for MAC systems it is allowing selection file with any other extension as well which should not be allowed.
For ex. you can select "*.bed.gz" genome reference file from MAC users which is incorrect as its extension is not FASTA or 2BIT.
Attachments
Issue Links
- relates to
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IGBF-1312 Improve error message shown upon opening a file before selecting a genome version
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- Closed
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Activity
| Field | Original Value | New Value |
|---|---|---|
| Description |
File --> Open Genome from file...--> Choose Reference File.
The allowed reference files extension are 2bit, bnib, fa, fas, fasta, fna, fsa, mpfa, fa.gz, fas.gz, fasta.gz, fna.gz, fsa.gz and mpfa.gz. For windows it is working as expected by not allowing selection of any file other than above mention extensions. But for MAC systems it is allowing selection file with any other extension as well which should not be allowed. For ex. you can select "*.bed.gz" genome reference file from MAC users which is incorrect as its extension is not FASTA or 2BIT. |
| Description |
File --> Open Genome from file...--> Choose Reference File.
The allowed reference files extension are 2bit, bnib, fa, fas, fasta, fna, fsa, mpfa, fa.gz, fas.gz, fasta.gz, fna.gz, fsa.gz and mpfa.gz. For windows it is working as expected by not allowing selection of any file other than above mention extensions. But for MAC systems it is allowing selection file with any other extension as well which should not be allowed. For ex. you can select "*.bed.gz" genome reference file from MAC users which is incorrect as its extension is not FASTA or 2BIT. |
File -> Open Genome from file...-> Choose Reference File.
The allowed reference files extension are 2bit, bnib, fa, fas, fasta, fna, fsa, mpfa, fa.gz, fas.gz, fasta.gz, fna.gz, fsa.gz and mpfa.gz. For windows it is working as expected by not allowing selection of any file other than above mention extensions. But for MAC systems it is allowing selection file with any other extension as well which should not be allowed. For ex. you can select "*.bed.gz" genome reference file from MAC users which is incorrect as its extension is not FASTA or 2BIT. |
| Workflow | Loraine Lab Workflow [ 18226 ] | Fall 2019 Workflow Update [ 18933 ] |
| Workflow | Fall 2019 Workflow Update [ 18933 ] | Revised Fall 2019 Workflow Update [ 21059 ] |
| Status | Open [ 1 ] | To-Do [ 10305 ] |
| Epic Link | IGBF-1765 [ 17855 ] |
| Description |
File -> Open Genome from file...-> Choose Reference File.
The allowed reference files extension are 2bit, bnib, fa, fas, fasta, fna, fsa, mpfa, fa.gz, fas.gz, fasta.gz, fna.gz, fsa.gz and mpfa.gz. For windows it is working as expected by not allowing selection of any file other than above mention extensions. But for MAC systems it is allowing selection file with any other extension as well which should not be allowed. For ex. you can select "*.bed.gz" genome reference file from MAC users which is incorrect as its extension is not FASTA or 2BIT. |
File > Open Genome from file... > Choose Reference File.
The allowed reference files extension are 2bit, bnib, fa, fas, fasta, fna, fsa, mpfa, fa.gz, fas.gz, fasta.gz, fna.gz, fsa.gz and mpfa.gz. For windows it is working as expected by not allowing selection of any file other than above mention extensions. But for MAC systems it is allowing selection file with any other extension as well which should not be allowed. For ex. you can select "*.bed.gz" genome reference file from MAC users which is incorrect as its extension is not FASTA or 2BIT. |
| Story Points | 1 |
| Labels | Intermediate | beginner |
| Labels | beginner | Beginner |
| Rank | Ranked higher |
| Rank | Ranked higher |
| Status | To-Do [ 10305 ] | In Progress [ 3 ] |
| Status | In Progress [ 3 ] | Needs 1st Level Review [ 10005 ] |
| Status | Needs 1st Level Review [ 10005 ] | First Level Review in Progress [ 10301 ] |
| Status | First Level Review in Progress [ 10301 ] | Ready for Pull Request [ 10304 ] |
| Status | Ready for Pull Request [ 10304 ] | Pull Request Submitted [ 10101 ] |
| Status | Pull Request Submitted [ 10101 ] | Reviewing Pull Request [ 10303 ] |
| Status | Reviewing Pull Request [ 10303 ] | Merged Needs Testing [ 10002 ] |
| Status | Merged Needs Testing [ 10002 ] | Post-merge Testing In Progress [ 10003 ] |
| Resolution | Done [ 10000 ] | |
| Status | Post-merge Testing In Progress [ 10003 ] | Closed [ 6 ] |