Details
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Type: Bug
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Status: Closed (View Workflow)
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Priority: Minor
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Resolution: Done
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Affects Version/s: None
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Fix Version/s: None
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Labels:
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Story Points:1
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Epic Link:
Description
File > Open Genome from file... > Choose Reference File.
The allowed reference files extension are 2bit, bnib, fa, fas, fasta, fna, fsa, mpfa, fa.gz, fas.gz, fasta.gz, fna.gz, fsa.gz and mpfa.gz.
For windows it is working as expected by not allowing selection of any file other than above mention extensions.
But for MAC systems it is allowing selection file with any other extension as well which should not be allowed.
For ex. you can select "*.bed.gz" genome reference file from MAC users which is incorrect as its extension is not FASTA or 2BIT.
Attachments
Issue Links
- relates to
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IGBF-1312 Improve error message shown upon opening a file before selecting a genome version
- Closed
Activity
Riddhi Jagdish Patil (Inactive)
created issue -
Riddhi Jagdish Patil (Inactive)
made changes -
Field | Original Value | New Value |
---|---|---|
Description |
File --> Open Genome from file...--> Choose Reference File.
The allowed reference files extension are 2bit, bnib, fa, fas, fasta, fna, fsa, mpfa, fa.gz, fas.gz, fasta.gz, fna.gz, fsa.gz and mpfa.gz. For windows it is working as expected by not allowing selection of any file other than above mention extensions. But for MAC systems it is allowing selection file with any other extension as well which should not be allowed. For ex. you can select "*.bed.gz" genome reference file from MAC users which is incorrect as its extension is not FASTA or 2BIT. |
Riddhi Jagdish Patil (Inactive)
made changes -
Description |
File --> Open Genome from file...--> Choose Reference File.
The allowed reference files extension are 2bit, bnib, fa, fas, fasta, fna, fsa, mpfa, fa.gz, fas.gz, fasta.gz, fna.gz, fsa.gz and mpfa.gz. For windows it is working as expected by not allowing selection of any file other than above mention extensions. But for MAC systems it is allowing selection file with any other extension as well which should not be allowed. For ex. you can select "*.bed.gz" genome reference file from MAC users which is incorrect as its extension is not FASTA or 2BIT. |
File -> Open Genome from file...-> Choose Reference File.
The allowed reference files extension are 2bit, bnib, fa, fas, fasta, fna, fsa, mpfa, fa.gz, fas.gz, fasta.gz, fna.gz, fsa.gz and mpfa.gz. For windows it is working as expected by not allowing selection of any file other than above mention extensions. But for MAC systems it is allowing selection file with any other extension as well which should not be allowed. For ex. you can select "*.bed.gz" genome reference file from MAC users which is incorrect as its extension is not FASTA or 2BIT. |
Riddhi Jagdish Patil (Inactive)
made changes -
Ann Loraine
made changes -
Workflow | Loraine Lab Workflow [ 18226 ] | Fall 2019 Workflow Update [ 18933 ] |
Ann Loraine
made changes -
Workflow | Fall 2019 Workflow Update [ 18933 ] | Revised Fall 2019 Workflow Update [ 21059 ] |
Status | Open [ 1 ] | To-Do [ 10305 ] |
Ann Loraine
made changes -
Epic Link | IGBF-1765 [ 17855 ] |
Ann Loraine
made changes -
Description |
File -> Open Genome from file...-> Choose Reference File.
The allowed reference files extension are 2bit, bnib, fa, fas, fasta, fna, fsa, mpfa, fa.gz, fas.gz, fasta.gz, fna.gz, fsa.gz and mpfa.gz. For windows it is working as expected by not allowing selection of any file other than above mention extensions. But for MAC systems it is allowing selection file with any other extension as well which should not be allowed. For ex. you can select "*.bed.gz" genome reference file from MAC users which is incorrect as its extension is not FASTA or 2BIT. |
File > Open Genome from file... > Choose Reference File.
The allowed reference files extension are 2bit, bnib, fa, fas, fasta, fna, fsa, mpfa, fa.gz, fas.gz, fasta.gz, fna.gz, fsa.gz and mpfa.gz. For windows it is working as expected by not allowing selection of any file other than above mention extensions. But for MAC systems it is allowing selection file with any other extension as well which should not be allowed. For ex. you can select "*.bed.gz" genome reference file from MAC users which is incorrect as its extension is not FASTA or 2BIT. |
Ann Loraine
made changes -
Story Points | 1 |
Ann Loraine
made changes -
Labels | Intermediate | beginner |
Ann Loraine
made changes -
Labels | beginner | Beginner |
Ann Loraine
made changes -
Rank | Ranked higher |
Ann Loraine
made changes -
Rank | Ranked higher |
Ann Loraine
made changes -
Status | To-Do [ 10305 ] | In Progress [ 3 ] |
Ann Loraine
made changes -
Status | In Progress [ 3 ] | Needs 1st Level Review [ 10005 ] |
Ann Loraine
made changes -
Status | Needs 1st Level Review [ 10005 ] | First Level Review in Progress [ 10301 ] |
Ann Loraine
made changes -
Status | First Level Review in Progress [ 10301 ] | Ready for Pull Request [ 10304 ] |
Ann Loraine
made changes -
Status | Ready for Pull Request [ 10304 ] | Pull Request Submitted [ 10101 ] |
Ann Loraine
made changes -
Status | Pull Request Submitted [ 10101 ] | Reviewing Pull Request [ 10303 ] |
Ann Loraine
made changes -
Status | Reviewing Pull Request [ 10303 ] | Merged Needs Testing [ 10002 ] |
Ann Loraine
made changes -
Status | Merged Needs Testing [ 10002 ] | Post-merge Testing In Progress [ 10003 ] |
Ann Loraine
made changes -
Resolution | Done [ 10000 ] | |
Status | Post-merge Testing In Progress [ 10003 ] | Closed [ 6 ] |