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  1. IGB
  2. IGBF-1597

Update A_thaliana_Apr_2008 file formats

        Details

        • Type: Updated Genome
        • Status: Closed (View Workflow)
        • Priority: Major
        • Resolution: Done
        • Affects Version/s: None
        • Fix Version/s: None
        • Labels:
          None
        • Story Points:
          1
        • Sprint:
          Spring 2019 Sprint 2, Spring 2019 Sprint 3, Spring 2019 Sprint 4, Spring 2019 Sprint 5

          Description

          convert bed to tabix-indexed bed
          convert gn to tabix-indexed bed
          update annots.xml

            Attachments

              Activity

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              Jill Jill Jenkins (Inactive) created issue -
              Jill Jill Jenkins (Inactive) made changes -
              Field Original Value New Value
              Epic Link IGBF-1478 [ 17563 ]
              Jill Jill Jenkins (Inactive) made changes -
              Rank Ranked higher
              Jill Jill Jenkins (Inactive) made changes -
              Assignee Ann Loraine [ aloraine ] Jill Jenkins [ jill ]
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              Jill Jill Jenkins (Inactive) added a comment - - edited

              All BED files updated - unsure of tabix application to .bgn or .gn files
              annots.xml updated

              Show
              Jill Jill Jenkins (Inactive) added a comment - - edited All BED files updated - unsure of tabix application to .bgn or .gn files annots.xml updated
              Jill Jill Jenkins (Inactive) made changes -
              Sprint Spring 2019 Sprint 2 [ 60 ]
              Jill Jill Jenkins (Inactive) made changes -
              Rank Ranked higher
              Jill Jill Jenkins (Inactive) made changes -
              Status Open [ 1 ] In Progress [ 3 ]
              Hide
              Permalink
              Jill Jill Jenkins (Inactive) added a comment - - edited

              Per Dr L. did not tabix update .bgn/.gn files - removed these references from xml file.

              Show
              Jill Jill Jenkins (Inactive) added a comment - - edited Per Dr L. did not tabix update .bgn/.gn files - removed these references from xml file.
              Jill Jill Jenkins (Inactive) made changes -
              Status In Progress [ 3 ] Needs 1st Level Review [ 10005 ]
              Jill Jill Jenkins (Inactive) made changes -
              Assignee Jill Jenkins [ jill ]
              ann.loraine Ann Loraine made changes -
              Sprint Spring 2019 Sprint 2 [ 60 ] Spring 2019 Sprint 2, Spring 2019 Sprint 3 [ 60, 61 ]
              ann.loraine Ann Loraine made changes -
              Rank Ranked higher
              ann.loraine Ann Loraine made changes -
              Sprint Spring 2019 Sprint 2, Spring 2019 Sprint 3 [ 60, 61 ] Spring 2019 Sprint 2, Spring 2019 Sprint 3, Spring 2019 Sprint 4 [ 60, 61, 62 ]
              ann.loraine Ann Loraine made changes -
              Rank Ranked higher
              ann.loraine Ann Loraine made changes -
              Sprint Spring 2019 Sprint 2, Spring 2019 Sprint 3, Spring 2019 Sprint 4 [ 60, 61, 62 ] Spring 2019 Sprint 2, Spring 2019 Sprint 3, Spring 2019 Sprint 4, Spring 2019 Sprint 5 [ 60, 61, 62, 63 ]
              ann.loraine Ann Loraine made changes -
              Rank Ranked higher
              ann.loraine Ann Loraine made changes -
              Sprint Spring 2019 Sprint 2, Spring 2019 Sprint 3, Spring 2019 Sprint 4, Spring 2019 Sprint 5 [ 60, 61, 62, 63 ] Spring 2019 Sprint 2, Spring 2019 Sprint 3, Spring 2019 Sprint 4, Spring 2019 Sprint 5, Spring 2019 Sprint 6 [ 60, 61, 62, 63, 64 ]
              ann.loraine Ann Loraine made changes -
              Rank Ranked higher
              ann.loraine Ann Loraine made changes -
              Sprint Spring 2019 Sprint 2, Spring 2019 Sprint 3, Spring 2019 Sprint 4, Spring 2019 Sprint 5, Spring 2019 Sprint 6 [ 60, 61, 62, 63, 64 ] Spring 2019 Sprint 2, Spring 2019 Sprint 3, Spring 2019 Sprint 4, Spring 2019 Sprint 5 [ 60, 61, 62, 63 ]
              ann.loraine Ann Loraine made changes -
              Rank Ranked lower
              ann.loraine Ann Loraine made changes -
              Epic Link IGBF-1478 [ 17563 ]
              ann.loraine Ann Loraine made changes -
              Resolution Done [ 10000 ]
              Status Needs 1st Level Review [ 10005 ] Closed [ 6 ]
              ann.loraine Ann Loraine made changes -
              Workflow Loraine Lab Workflow [ 18318 ] Fall 2019 Workflow Update [ 20725 ]
              ann.loraine Ann Loraine made changes -
              Workflow Fall 2019 Workflow Update [ 20725 ] Revised Fall 2019 Workflow Update [ 22193 ]

                People

                • Assignee:
                  Unassigned
                  Reporter:
                  Jill Jill Jenkins (Inactive)
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                  Watchers:
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                  Dates

                  • Created:
                    Updated:
                    Resolved: