Details
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Type: Task
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Status: Closed (View Workflow)
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Priority: Major
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Resolution: Done
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Affects Version/s: None
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Fix Version/s: 9.1.6 Major Release
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Labels:None
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Story Points:1
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Epic Link:
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Sprint:Fall 1: 14 Sep - 25 Sep, Fall 2: 28 Sep - 9 Oct, Fall 3: Oct 12 - Oct 23
Description
Situation: A user commented on the lack of variants for the Androgen Receptor (AR) gene in humans. This paper discusses several variants, while the current human annotation for hg19 and hg38 has only two variants. We would like to add an additional annotation to mirror what is in NCBI .
Task: Add the RefSeq annotation for hg19 and hg38 for humans. Need to find additional gene name information for field 13 and 14.
Attachments
Issue Links
- relates to
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IGBF-3330 Add mm39 (GRCm39) mouse genome to IGB
- Closed
Activity
Nowlan Freese
created issue -
Nowlan Freese
made changes -
Ann Loraine
made changes -
Workflow | Loraine Lab Workflow [ 18338 ] | Fall 2019 Workflow Update [ 18958 ] |
Ann Loraine
made changes -
Workflow | Fall 2019 Workflow Update [ 18958 ] | Revised Fall 2019 Workflow Update [ 21083 ] |
Status | Open [ 1 ] | In Progress [ 3 ] |
Nowlan Freese
made changes -
Status | In Progress [ 3 ] | To-Do [ 10305 ] |
Ann Loraine
made changes -
Epic Link | IGBF-1765 [ 17855 ] |
Ann Loraine
made changes -
Sprint | Summer 4: 14 Jul - 28 Jul [ 99 ] |
Ann Loraine
made changes -
Rank | Ranked lower |
Ann Loraine
made changes -
Sprint | Summer 4: 14 Jul - 28 Jul [ 99 ] |
Ann Loraine
made changes -
Rank | Ranked higher |
Ann Loraine
made changes -
Rank | Ranked higher |
Ann Loraine
made changes -
Sprint | Fall 1: 14 Sep - 25 Sep [ 103 ] |
Ann Loraine
made changes -
Rank | Ranked lower |
Ann Loraine
made changes -
Rank | Ranked higher |
Ann Loraine
made changes -
Rank | Ranked higher |
Nowlan Freese
made changes -
Status | To-Do [ 10305 ] | In Progress [ 3 ] |
Nowlan Freese
made changes -
Assignee | Nowlan Freese [ nfreese ] |
Nowlan Freese
made changes -
Status | In Progress [ 3 ] | To-Do [ 10305 ] |
Ann Loraine
made changes -
Sprint | Fall 1: 14 Sep - 25 Sep [ 103 ] | Fall 1: 14 Sep - 25 Sep, Fall 2: 28 Sep - 9 Oct [ 103, 104 ] |
Ann Loraine
made changes -
Rank | Ranked higher |
Ann Loraine
made changes -
Rank | Ranked higher |
Nowlan Freese
made changes -
Status | To-Do [ 10305 ] | In Progress [ 3 ] |
Nowlan Freese
made changes -
Assignee | Nowlan Freese [ nfreese ] | Ann Loraine [ aloraine ] |
Nowlan Freese
made changes -
Status | In Progress [ 3 ] | Needs 1st Level Review [ 10005 ] |
Nowlan Freese
made changes -
Status | Needs 1st Level Review [ 10005 ] | First Level Review in Progress [ 10301 ] |
Nowlan Freese
made changes -
Status | First Level Review in Progress [ 10301 ] | Needs 1st Level Review [ 10005 ] |
Nowlan Freese
made changes -
Status | Needs 1st Level Review [ 10005 ] | First Level Review in Progress [ 10301 ] |
Nowlan Freese
made changes -
Status | First Level Review in Progress [ 10301 ] | Ready for Pull Request [ 10304 ] |
Nowlan Freese
made changes -
Status | Ready for Pull Request [ 10304 ] | Pull Request Submitted [ 10101 ] |
Ann Loraine
made changes -
Sprint | Fall 1: 14 Sep - 25 Sep, Fall 2: 28 Sep - 9 Oct [ 103, 104 ] | Fall 1: 14 Sep - 25 Sep, Fall 2: 28 Sep - 9 Oct, Fall 3: Oct 12 - Oct 23 [ 103, 104, 106 ] |
Ann Loraine
made changes -
Rank | Ranked higher |
Ann Loraine
made changes -
Assignee | Ann Loraine [ aloraine ] |
Ann Loraine
made changes -
Status | Pull Request Submitted [ 10101 ] | Reviewing Pull Request [ 10303 ] |
Ann Loraine
made changes -
Status | Reviewing Pull Request [ 10303 ] | Merged Needs Testing [ 10002 ] |
Ann Loraine
made changes -
Status | Merged Needs Testing [ 10002 ] | Post-merge Testing In Progress [ 10003 ] |
Ann Loraine
made changes -
Assignee | Ann Loraine [ aloraine ] |
Ann Loraine
made changes -
Status | Post-merge Testing In Progress [ 10003 ] | Merged Needs Testing [ 10002 ] |
Ann Loraine
made changes -
Assignee | Ann Loraine [ aloraine ] |
Sai Supreeth Segu (Inactive)
made changes -
Assignee | Sai Supreeth Segu [ ssegu ] |
Sai Supreeth Segu (Inactive)
made changes -
Status | Merged Needs Testing [ 10002 ] | Post-merge Testing In Progress [ 10003 ] |
Sai Supreeth Segu (Inactive)
made changes -
Attachment | MetadataCompare.png [ 14905 ] | |
Attachment | SNP(old vs new).png [ 14906 ] | |
Attachment | RefSeq_Compare.png [ 14907 ] |
Sai Supreeth Segu (Inactive)
made changes -
Assignee | Sai Supreeth Segu [ ssegu ] |
Sai Supreeth Segu (Inactive)
made changes -
Resolution | Done [ 10000 ] | |
Status | Post-merge Testing In Progress [ 10003 ] | Closed [ 6 ] |
Sai Supreeth Segu (Inactive)
made changes -
Assignee | Nowlan Freese [ nfreese ] |
Nowlan Freese
made changes -
Fix Version/s | 9.1.6 Major Release [ 10604 ] |
Nowlan Freese
made changes -