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  1. IGB
  2. IGBF-1620

Fix Open URL... when no genome selected

        Details

        • Story Points:
          1
        • Epic Link:
        • Sprint:
          Spring 2019 Sprint 3, Spring 2019 Sprint 5, Spring 2019 Sprint 6, Summer 2019 Sprint 7, Summer 2019 Sprint 8

          Description

          Situation: A user wants to load data from a URL without first selecting a genome. If they click File > Open URL... they will receive an error message informing them to first select a genome.

          Task: Enable a user to select a file from a URL without having to first select a genome.

            Attachments

              Issue Links

              relates to

              Task - A task that needs to be done. IGBF-1590 Implement View in IGB button

              • Major - Major loss of function.
              • Closed

              Improvement - An improvement or enhancement to an existing feature or task. IGBF-1509 Open File... should work if no genome available

              • Minor - Minor loss of function, or other problem where easy workaround is present.
              • Closed

                Activity

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                nfreese Nowlan Freese created issue -
                nfreese Nowlan Freese made changes -
                Field Original Value New Value
                Link This issue relates to IGBF-1509 [ IGBF-1509 ]
                nfreese Nowlan Freese made changes -
                Link This issue relates to IGBF-1590 [ IGBF-1590 ]
                ann.loraine Ann Loraine made changes -
                Sprint Spring 2019 Sprint 3 [ 61 ] Spring 2019 Sprint 3, Spring 2019 Sprint 4 [ 61, 62 ]
                ann.loraine Ann Loraine made changes -
                Rank Ranked higher
                nfreese Nowlan Freese made changes -
                Sprint Spring 2019 Sprint 3, Spring 2019 Sprint 4 [ 61, 62 ] Spring 2019 Sprint 3 [ 61 ]
                nfreese Nowlan Freese made changes -
                Sprint Spring 2019 Sprint 3 [ 61 ] Spring 2019 Sprint 3, Spring 2019 Sprint 5 [ 61, 63 ]
                nfreese Nowlan Freese made changes -
                Rank Ranked higher
                ann.loraine Ann Loraine made changes -
                Sprint Spring 2019 Sprint 3, Spring 2019 Sprint 5 [ 61, 63 ] Spring 2019 Sprint 3, Spring 2019 Sprint 5, Spring 2019 Sprint 6 [ 61, 63, 64 ]
                ann.loraine Ann Loraine made changes -
                Rank Ranked higher
                ann.loraine Ann Loraine made changes -
                Rank Ranked higher
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                ann.loraine Ann Loraine added a comment -

                Review code by Riddhi Patil - see linked issues.

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                ann.loraine Ann Loraine added a comment - Review code by Riddhi Patil - see linked issues.
                ann.loraine Ann Loraine made changes -
                Labels Beginner
                ann.loraine Ann Loraine made changes -
                Sprint Spring 2019 Sprint 3, Spring 2019 Sprint 5, Spring 2019 Sprint 6 [ 61, 63, 64 ] Spring 2019 Sprint 3, Spring 2019 Sprint 5, Spring 2019 Sprint 6, Summer 2019 Sprint 7 [ 61, 63, 64, 66 ]
                ann.loraine Ann Loraine made changes -
                Rank Ranked higher
                ann.loraine Ann Loraine made changes -
                Rank Ranked higher
                ann.loraine Ann Loraine made changes -
                Rank Ranked higher
                ann.loraine Ann Loraine made changes -
                Epic Link IGBF-1765 [ 17855 ]
                ann.loraine Ann Loraine made changes -
                Fix Version/s 9.1.0 Major Release [ 10601 ]
                sameer Sameer Shanbhag (Inactive) made changes -
                Status Open [ 1 ] In Progress [ 3 ]
                sameer Sameer Shanbhag (Inactive) made changes -
                Assignee Sameer Shanbhag [ sameer ]
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                sameer Sameer Shanbhag (Inactive) added a comment -

                [~aloraine]
                I have updated the code with respect to the requirements. You can find my branch here:

                https://bitbucket.org/sshanbh1/sameer-igb/commits/d39eb545ba0dbf286135c7465fd587f7e9882634?at=IGBF-1620

                The Build runs perfectly fine, I will be moving the Ticket on the Board.

                Show
                sameer Sameer Shanbhag (Inactive) added a comment - [~aloraine] I have updated the code with respect to the requirements. You can find my branch here: https://bitbucket.org/sshanbh1/sameer-igb/commits/d39eb545ba0dbf286135c7465fd587f7e9882634?at=IGBF-1620 The Build runs perfectly fine, I will be moving the Ticket on the Board.
                sameer Sameer Shanbhag (Inactive) made changes -
                Status In Progress [ 3 ] Needs 1st Level Review [ 10005 ]
                sameer Sameer Shanbhag (Inactive) made changes -
                Assignee Sameer Shanbhag [ sameer ]
                sameer Sameer Shanbhag (Inactive) made changes -
                Assignee Sameer Shanbhag [ sameer ]
                sameer Sameer Shanbhag (Inactive) made changes -
                Assignee Sameer Shanbhag [ sameer ]
                ann.loraine Ann Loraine made changes -
                Sprint Spring 2019 Sprint 3, Spring 2019 Sprint 5, Spring 2019 Sprint 6, Summer 2019 Sprint 7 [ 61, 63, 64, 66 ] Spring 2019 Sprint 3, Spring 2019 Sprint 5, Spring 2019 Sprint 6, Summer 2019 Sprint 7, Summer 2019 Sprint 8 [ 61, 63, 64, 66, 67 ]
                ann.loraine Ann Loraine made changes -
                Rank Ranked higher
                nfreese Nowlan Freese made changes -
                Status Needs 1st Level Review [ 10005 ] Reviewing [ 10301 ]
                nfreese Nowlan Freese made changes -
                Assignee Nowlan Freese [ nfreese ]
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                nfreese Nowlan Freese added a comment -

                1st level review: Working correctly, I can load a file from URL without first selecting a genome.

                Show
                nfreese Nowlan Freese added a comment - 1st level review: Working correctly, I can load a file from URL without first selecting a genome.
                nfreese Nowlan Freese made changes -
                Status Reviewing [ 10301 ] Ready for Pull Request [ 10304 ]
                nfreese Nowlan Freese made changes -
                Assignee Nowlan Freese [ nfreese ] Sameer Shanbhag [ sameer ]
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                sameer Sameer Shanbhag (Inactive) added a comment -

                Thank you for the update.

                Heres the pull request for the same:
                https://bitbucket.org/lorainelab/integrated-genome-browser/pull-requests/696/igbf-1620-fix-open-url-when-no-genome/diff

                Show
                sameer Sameer Shanbhag (Inactive) added a comment - Thank you for the update. Heres the pull request for the same: https://bitbucket.org/lorainelab/integrated-genome-browser/pull-requests/696/igbf-1620-fix-open-url-when-no-genome/diff
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                ann.loraine Ann Loraine added a comment -

                Merged to master.

                Show
                ann.loraine Ann Loraine added a comment - Merged to master.
                ann.loraine Ann Loraine made changes -
                Status Ready for Pull Request [ 10304 ] Needs Testing [ 10002 ]
                stiwari8 Srishti Tiwari (Inactive) made changes -
                Assignee Sameer Shanbhag [ sameer ] Srishti Tiwari [ stiwari8 ]
                stiwari8 Srishti Tiwari (Inactive) made changes -
                Status Needs Testing [ 10002 ] Testing In Progress [ 10003 ]
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                stiwari8 Srishti Tiwari (Inactive) added a comment -

                Working correctly in Windows.

                Show
                stiwari8 Srishti Tiwari (Inactive) added a comment - Working correctly in Windows.
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                nfreese Nowlan Freese added a comment -

                Working correctly on Mac.

                Show
                nfreese Nowlan Freese added a comment - Working correctly on Mac.
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                stiwari8 Srishti Tiwari (Inactive) added a comment -

                Does not work on Linux.

                Show
                stiwari8 Srishti Tiwari (Inactive) added a comment - Does not work on Linux.
                stiwari8 Srishti Tiwari (Inactive) made changes -
                Status Testing In Progress [ 10003 ] Open [ 1 ]
                stiwari8 Srishti Tiwari (Inactive) made changes -
                Assignee Srishti Tiwari [ stiwari8 ]
                sameer Sameer Shanbhag (Inactive) made changes -
                Assignee Sameer Shanbhag [ sameer ]
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                sameer Sameer Shanbhag (Inactive) added a comment -

                Srishti Tiwari Works perfectly fine on Ubuntu Machine.

                Could you please test again using the Latest Version of the App. You can use the Following Download Link:

                https://bitbucket.org/lorainelab/integrated-genome-browser/downloads/IGB-master.sh

                Show
                sameer Sameer Shanbhag (Inactive) added a comment - Srishti Tiwari Works perfectly fine on Ubuntu Machine. Could you please test again using the Latest Version of the App. You can use the Following Download Link: https://bitbucket.org/lorainelab/integrated-genome-browser/downloads/IGB-master.sh
                sameer Sameer Shanbhag (Inactive) made changes -
                Status Open [ 1 ] Needs Testing [ 10002 ]
                sameer Sameer Shanbhag (Inactive) made changes -
                Assignee Sameer Shanbhag [ sameer ] Srishti Tiwari [ stiwari8 ]
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                stiwari8 Srishti Tiwari (Inactive) added a comment -

                If we run IGB-master.sh it works fine, but IGB-master.jar generated for download is the old version. Raising different issue for the same.

                Show
                stiwari8 Srishti Tiwari (Inactive) added a comment - If we run IGB-master.sh it works fine, but IGB-master.jar generated for download is the old version. Raising different issue for the same.
                stiwari8 Srishti Tiwari (Inactive) made changes -
                Assignee Srishti Tiwari [ stiwari8 ]
                stiwari8 Srishti Tiwari (Inactive) made changes -
                Assignee Srishti Tiwari [ stiwari8 ]
                stiwari8 Srishti Tiwari (Inactive) made changes -
                Resolution Done [ 10000 ]
                Status Needs Testing [ 10002 ] Closed [ 6 ]
                sameer Sameer Shanbhag (Inactive) made changes -
                Assignee Srishti Tiwari [ stiwari8 ] Sameer Shanbhag [ sameer ]
                ann.loraine Ann Loraine made changes -
                Workflow Loraine Lab Workflow [ 18341 ] Fall 2019 Workflow Update [ 20073 ]
                ann.loraine Ann Loraine made changes -
                Workflow Fall 2019 Workflow Update [ 20073 ] Revised Fall 2019 Workflow Update [ 22206 ]

                  People

                  • Assignee:
                    sameer Sameer Shanbhag (Inactive)
                    Reporter:
                    nfreese Nowlan Freese
                  • Votes:
                    0 Vote for this issue
                    Watchers:
                    4 Start watching this issue

                    Dates

                    • Created:
                      Updated:
                      Resolved: