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  1. IGB
  2. IGBF-1653

Property Search in Advanced Search tab throws IllegalArgumentException

    Details

      Description

      Investigate and determine why this happens.
      Find out if it affects released branch 9.0.2 (get from bioviz.org).
      Read user's guide Advanced Search documentation as background.

      To repeat:

      1) Click Advanced Search tab
      2) Select PropertySearch, don't enter query string (leave text blank)
      3) Click Search icon (magnifying glass button on right of text entry)

      Observe exception:

      14:51:37.494 ERROR c.a.genometry.thread.CThreadWorker - Comparison method violates its general contract!
      java.lang.IllegalArgumentException: Comparison method violates its general contract!
      at java.util.TimSort.mergeHi(TimSort.java:899) ~[na:1.8.0_192]
      at java.util.TimSort.mergeAt(TimSort.java:516) ~[na:1.8.0_192]
      at java.util.TimSort.mergeCollapse(TimSort.java:441) ~[na:1.8.0_192]
      at java.util.TimSort.sort(TimSort.java:245) ~[na:1.8.0_192]
      at java.util.Arrays.sort(Arrays.java:1512) ~[na:1.8.0_192]
      at java.util.ArrayList.sort(ArrayList.java:1462) ~[na:1.8.0_192]
      at java.util.Collections.sort(Collections.java:175) ~[na:1.8.0_192]
      at com.affymetrix.igb.searchmodeidorprops.SearchModeIDOrProps.findLocalSyms(SearchModeIDOrProps.java:180) ~[na:na]
      at com.affymetrix.igb.searchmodeidorprops.SearchModeIDOrProps.search(SearchModeIDOrProps.java:105) ~[na:na]
      at com.affymetrix.igb.searchmodeidorprops.SearchModeID.search(SearchModeID.java:86) ~[na:na]
      at com.affymetrix.igb.keywordsearch.KeyWordSearch.search(KeyWordSearch.java:65) ~[na:na]
      at com.affymetrix.igb.search.SearchView$SearchAction$1.runInBackground(SearchView.java:175) ~[na:na]
      at com.affymetrix.igb.search.SearchView$SearchAction$1.runInBackground(SearchView.java:155) ~[na:na]
      at com.affymetrix.genometry.thread.CThreadWorker.doInBackground(CThreadWorker.java:73) ~[na:na]
      at javax.swing.SwingWorker$1.call(SwingWorker.java:295) [na:1.8.0_192]
      at java.util.concurrent.FutureTask.run(FutureTask.java:266) [na:1.8.0_192]
      at javax.swing.SwingWorker.run(SwingWorker.java:334) [na:1.8.0_192]
      at java.util.concurrent.ThreadPoolExecutor.runWorker(ThreadPoolExecutor.java:1149) [na:1.8.0_192]
      at java.util.concurrent.ThreadPoolExecutor$Worker.run(ThreadPoolExecutor.java:624) [na:1.8.0_192]
      at java.lang.Thread.run(Thread.java:748) [na:1.8.0_192]

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              • Assignee:
                svallapu Sai Charan Reddy Vallapureddy (Inactive)
                Reporter:
                ann.loraine Ann Loraine
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                Dates

                • Created:
                  Updated:
                  Resolved: