Details
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Type:
Task
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Status: Closed (View Workflow)
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Priority:
Major
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Resolution: Done
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Affects Version/s: None
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Fix Version/s: None
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Labels:None
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Story Points:1
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Epic Link:
Description
Attachments
Issue Links
- relates to
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IGBF-2246 Create new App to show results from personal genotyping platforms
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- Closed
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This could be very useful for showing summary information about variants:
https://myvariant.info/
It is a REST service that returns JSON with summary information about SNPs and other variants.
The Web site above has examples showing how to use it.
It is one of the "biothings" APIs which brings together a lot of information about genomic entities into computer-friendly formats.
So for example, IGB could use the information directly, or IGB could link to a Web page (hosted on Bioviz or some other site) that shows data from the REST service. There are a lot of possibilities.
Attached is a sample output in json - the same example from the Web site, which is: https://myvariant.info/v1/variant/chr6%3Ag.152708291G%3EA?dotfield=true&callback=%20