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  1. IGB
  2. IGBF-1811

Investigate DE Analysis Apps

        Details

        • Type: Task
        • Status: Closed (View Workflow)
        • Priority: Major
        • Resolution: Done
        • Affects Version/s: None
        • Fix Version/s: None
        • Labels:
          None

          Description

          Task: Investigate how to make the various apps in the Discovery Environment which BioViz-CyVerse will use to run analyses, such as generating depth graphs from bam files, scaled depth graphs, or generating an index file.

            Attachments

              Issue Links

              relates to

              Task - A task that needs to be done. IGBF-1623 Implement DepthGraph App in CyVerse

              • Major - Major loss of function.
              • Closed

              Task - A task that needs to be done. IGBF-1857 Implement Scaled Coverage Graph App in DE

              • Major - Major loss of function.
              • Closed

              Task - A task that needs to be done. IGBF-1858 Implement DREME Motif Finder App in DE

              • Major - Major loss of function.
              • Closed

                Activity

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                nfreese Nowlan Freese created issue -
                nfreese Nowlan Freese made changes -
                Field Original Value New Value
                Epic Link IGBF-1482 [ 17568 ]
                nfreese Nowlan Freese made changes -
                Status Open [ 1 ] In Progress [ 3 ]
                ann.loraine Ann Loraine made changes -
                Sprint Summer 2019 Sprint 8 [ 67 ] Summer 2019 Sprint 8, Summer 2019 Sprint 9 [ 67, 68 ]
                ann.loraine Ann Loraine made changes -
                Rank Ranked higher
                nfreese Nowlan Freese made changes -
                Summary Create DE Analysis Apps Investigate DE Analysis Apps
                Description Task: Create the various apps in the Discovery Environment which BioViz-CyVerse will use to run analyses, such as generating depth graphs from bam files, or generating an index file. Task: Investigate how to make the various apps in the Discovery Environment which BioViz-CyVerse will use to run analyses, such as generating depth graphs from bam files, scaled depth graphs, or generating an index file.
                Story Points 3 2
                nfreese Nowlan Freese made changes -
                Link This issue relates to IGBF-1623 [ IGBF-1623 ]
                nfreese Nowlan Freese made changes -
                Link This issue relates to IGBF-1857 [ IGBF-1857 ]
                nfreese Nowlan Freese made changes -
                Link This issue relates to IGBF-1858 [ IGBF-1858 ]
                nfreese Nowlan Freese made changes -
                Resolution Done [ 10000 ]
                Status In Progress [ 3 ] Closed [ 6 ]
                ann.loraine Ann Loraine made changes -
                Workflow Loraine Lab Workflow [ 18533 ] Fall 2019 Workflow Update [ 20221 ]
                ann.loraine Ann Loraine made changes -
                Workflow Fall 2019 Workflow Update [ 20221 ] Revised Fall 2019 Workflow Update [ 22360 ]

                  People

                  • Assignee:
                    nfreese Nowlan Freese
                    Reporter:
                    nfreese Nowlan Freese
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                    Dates

                    • Created:
                      Updated:
                      Resolved: