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  1. IGB
  2. IGBF-2091

Add app store alpha to list of repositories in IGB 9.1.0

        Details

        • Type: Task
        • Status: Closed (View Workflow)
        • Priority: Major
        • Resolution: Done
        • Affects Version/s: None
        • Fix Version/s: None
        • Labels:
          None

          Description

          Update IGB's default list of App repositories:

          • Remove all repositories currently listed except for "BioViz"
          • Add a new repository:

          Name: App Store
          URL: https://apps.bioviz.org/obr/releases/
          Enabled: True

            Attachments

              Activity

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              ann.loraine Ann Loraine created issue -
              ann.loraine Ann Loraine made changes -
              Field Original Value New Value
              Epic Link IGBF-2084 [ 18188 ]
              ann.loraine Ann Loraine made changes -
              Rank Ranked higher
              ann.loraine Ann Loraine made changes -
              Assignee Ann Loraine [ aloraine ]
              ann.loraine Ann Loraine made changes -
              Epic Link IGBF-2084 [ 18188 ] IGBF-1388 [ 17463 ]
              ann.loraine Ann Loraine made changes -
              Description Update IGB's default list of App repositories:

              * Remove all repositories currently listed
              * Add https://appstore.bioviz.org/obr/releases/ - make this active               		Update IGB's default list of App repositories:

              * Remove all repositories currently listed
              * Add https://appstore.bioviz.org/obr/releases/ - make this the active on
              ann.loraine Ann Loraine made changes -
              Description Update IGB's default list of App repositories:

              * Remove all repositories currently listed
              * Add https://appstore.bioviz.org/obr/releases/ - make this the active on               		Update IGB's default list of App repositories:

              * Remove all repositories currently listed
              * Add https://appstore.bioviz.org/obr/releases/ - make this the active one
              ann.loraine Ann Loraine made changes -
              Description Update IGB's default list of App repositories:

              * Remove all repositories currently listed
              * Add https://appstore.bioviz.org/obr/releases/ - make this the active one               		Update IGB's default list of App repositories:

              * Remove all repositories currently listed except for "igbserver" on bioviz.org
              * Add https://appstore.bioviz.org/obr/releases/ - make this the active one
              ann.loraine Ann Loraine made changes -
              Description Update IGB's default list of App repositories:

              * Remove all repositories currently listed except for "igbserver" on bioviz.org
              * Add https://appstore.bioviz.org/obr/releases/ - make this the active one               		Update IGB's default list of App repositories:

              * Remove all repositories currently listed except for "BioViz"
              * Add https://appstore.bioviz.org/obr/releases/ - make this the active one
              ann.loraine Ann Loraine made changes -
              Description Update IGB's default list of App repositories:

              * Remove all repositories currently listed except for "BioViz"
              * Add https://appstore.bioviz.org/obr/releases/ - make this the active one               		Update IGB's default list of App repositories:

              * Remove all repositories currently listed except for "BioViz"
              * Add a new repository:

              Name: App Store
              URL: https://appstore.bioviz.org/obr/releases/
              Enabled: True
              ann.loraine Ann Loraine made changes -
              Assignee Noor Zahara [ noor91zahara ]
              ann.loraine Ann Loraine made changes -
              Description Update IGB's default list of App repositories:

              * Remove all repositories currently listed except for "BioViz"
              * Add a new repository:

              Name: App Store
              URL: https://appstore.bioviz.org/obr/releases/
              Enabled: True               		Update IGB's default list of App repositories:

              * Remove all repositories currently listed except for "BioViz"
              * Add a new repository:

              Name: App Store
              URL: https://apps.bioviz.org/obr/releases/
              Enabled: True
              noor91zahara Noor Zahara (Inactive) made changes -
              Status To-Do [ 10305 ] In Progress [ 3 ]
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              noor91zahara Noor Zahara (Inactive) added a comment -

              Code changes - https://bitbucket.org/noorzahara/integrated-genome-browser-local1/branch/IGBF-2091#diff

              Show
              noor91zahara Noor Zahara (Inactive) added a comment - Code changes - https://bitbucket.org/noorzahara/integrated-genome-browser-local1/branch/IGBF-2091#diff
              noor91zahara Noor Zahara (Inactive) made changes -
              Status In Progress [ 3 ] Needs 1st Level Review [ 10005 ]
              noor91zahara Noor Zahara (Inactive) made changes -
              Assignee Noor Zahara [ noor91zahara ]
              ann.loraine Ann Loraine made changes -
              Status Needs 1st Level Review [ 10005 ] First Level Review in Progress [ 10301 ]
              ann.loraine Ann Loraine made changes -
              Status First Level Review in Progress [ 10301 ] To-Do [ 10305 ]
              Hide
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              ann.loraine Ann Loraine added a comment -

              Can you investigate:

              • igbDefaultPrefs.xml appears to be an obsolete file. So far as I know, preference files packaged with IGB are now JSON not XML

              Please update the tests to reflect current functionality.

              If igbDefaultPrefs.xml should not be removed, remove leading space in <repository name=" App Store"

              Show
              ann.loraine Ann Loraine added a comment - Can you investigate: igbDefaultPrefs.xml appears to be an obsolete file. So far as I know, preference files packaged with IGB are now JSON not XML Please update the tests to reflect current functionality. If igbDefaultPrefs.xml should not be removed, remove leading space in <repository name=" App Store"
              ann.loraine Ann Loraine made changes -
              Assignee Noor Zahara [ noor91zahara ]
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              noor91zahara Noor Zahara (Inactive) added a comment - - edited

              igbDefaultPrefs.xml is not used anymore.

              Testing Steps-

              Delete all the repositories from App repositories panel (Configure -> App Repositories)
              Re-run IGB, check for the default repositories that will be listed.

              Show
              noor91zahara Noor Zahara (Inactive) added a comment - - edited igbDefaultPrefs.xml is not used anymore. Testing Steps- Delete all the repositories from App repositories panel (Configure -> App Repositories) Re-run IGB, check for the default repositories that will be listed.
              noor91zahara Noor Zahara (Inactive) made changes -
              Status To-Do [ 10305 ] In Progress [ 3 ]
              noor91zahara Noor Zahara (Inactive) made changes -
              Status In Progress [ 3 ] Needs 1st Level Review [ 10005 ]
              noor91zahara Noor Zahara (Inactive) made changes -
              Assignee Noor Zahara [ noor91zahara ]
              ann.loraine Ann Loraine made changes -
              Status Needs 1st Level Review [ 10005 ] First Level Review in Progress [ 10301 ]
              ann.loraine Ann Loraine made changes -
              Status First Level Review in Progress [ 10301 ] Ready for Pull Request [ 10304 ]
              ann.loraine Ann Loraine made changes -
              Assignee Noor Zahara [ noor91zahara ]
              Hide
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              noor91zahara Noor Zahara (Inactive) added a comment -

              PR Submitted - https://bitbucket.org/lorainelab/integrated-genome-browser/pull-requests/749/igbf-2091-add-alpha-appstore-to-default/diff

              Show
              noor91zahara Noor Zahara (Inactive) added a comment - PR Submitted - https://bitbucket.org/lorainelab/integrated-genome-browser/pull-requests/749/igbf-2091-add-alpha-appstore-to-default/diff
              noor91zahara Noor Zahara (Inactive) made changes -
              Status Ready for Pull Request [ 10304 ] Pull Request Submitted [ 10101 ]
              noor91zahara Noor Zahara (Inactive) made changes -
              Assignee Noor Zahara [ noor91zahara ]
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              ann.loraine Ann Loraine added a comment -

              Since igbDefaultPrefs.xml is not used anymore, please remove it from the code base and update tests accordingly.

              Show
              ann.loraine Ann Loraine added a comment - Since igbDefaultPrefs.xml is not used anymore, please remove it from the code base and update tests accordingly.
              ann.loraine Ann Loraine made changes -
              Assignee Noor Zahara [ noor91zahara ]
              ann.loraine Ann Loraine made changes -
              Status Pull Request Submitted [ 10101 ] Reviewing Pull Request [ 10303 ]
              ann.loraine Ann Loraine made changes -
              Status Reviewing Pull Request [ 10303 ] To-Do [ 10305 ]
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              noor91zahara Noor Zahara (Inactive) added a comment -

              Removed the igbDefaultPrefs.xml from code base and updated the tests files accordingly.

              Show
              noor91zahara Noor Zahara (Inactive) added a comment - Removed the igbDefaultPrefs.xml from code base and updated the tests files accordingly.
              noor91zahara Noor Zahara (Inactive) made changes -
              Status To-Do [ 10305 ] In Progress [ 3 ]
              noor91zahara Noor Zahara (Inactive) made changes -
              Status In Progress [ 3 ] Needs 1st Level Review [ 10005 ]
              noor91zahara Noor Zahara (Inactive) made changes -
              Assignee Noor Zahara [ noor91zahara ]
              ann.loraine Ann Loraine made changes -
              Status Needs 1st Level Review [ 10005 ] First Level Review in Progress [ 10301 ]
              ann.loraine Ann Loraine made changes -
              Status First Level Review in Progress [ 10301 ] Ready for Pull Request [ 10304 ]
              Hide
              Permalink
              ann.loraine Ann Loraine added a comment -

              Please submit new PR for the changes - thank you.

              Noor Zahara

              Show
              ann.loraine Ann Loraine added a comment - Please submit new PR for the changes - thank you. Noor Zahara
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              noor91zahara Noor Zahara (Inactive) added a comment -

              PR Submitted - https://bitbucket.org/lorainelab/integrated-genome-browser/pull-requests/750/igbf-2091/diff

              Show
              noor91zahara Noor Zahara (Inactive) added a comment - PR Submitted - https://bitbucket.org/lorainelab/integrated-genome-browser/pull-requests/750/igbf-2091/diff
              noor91zahara Noor Zahara (Inactive) made changes -
              Status Ready for Pull Request [ 10304 ] Pull Request Submitted [ 10101 ]
              pbadzuh Philip Badzuh (Inactive) made changes -
              Status Pull Request Submitted [ 10101 ] Reviewing Pull Request [ 10303 ]
              pbadzuh Philip Badzuh (Inactive) made changes -
              Status Reviewing Pull Request [ 10303 ] Merged Needs Testing [ 10002 ]
              pbadzuh Philip Badzuh (Inactive) made changes -
              Assignee Philip Badzuh [ pbadzuh ]
              pbadzuh Philip Badzuh (Inactive) made changes -
              Status Merged Needs Testing [ 10002 ] Post-merge Testing In Progress [ 10003 ]
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              pbadzuh Philip Badzuh (Inactive) added a comment -

              The default list of app repos is updated as expected. Tested on macOS high sierra.

              Show
              pbadzuh Philip Badzuh (Inactive) added a comment - The default list of app repos is updated as expected. Tested on macOS high sierra.
              pbadzuh Philip Badzuh (Inactive) made changes -
              Resolution Done [ 10000 ]
              Status Post-merge Testing In Progress [ 10003 ] Closed [ 6 ]
              pbadzuh Philip Badzuh (Inactive) made changes -
              Assignee Philip Badzuh [ pbadzuh ] Noor Zahara [ noor91zahara ]

                People

                • Assignee:
                  noor91zahara Noor Zahara (Inactive)
                  Reporter:
                  ann.loraine Ann Loraine
                • Votes:
                  0 Vote for this issue
                  Watchers:
                  3 Start watching this issue

                  Dates

                  • Created:
                    Updated:
                    Resolved: