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  1. IGB
  2. IGBF-2303

Investigate: New version of ProtAnnot not getting installed by App Store

    Details

    • Type: Task
    • Status: Closed (View Workflow)
    • Priority: Major
    • Resolution: Done
    • Affects Version/s: None
    • Fix Version/s: None
    • Labels:
    • Story Points:
      1
    • Sprint:
      Spring 5 : 16 Mar to 27 Mar, Spring 6 : 30 Mar to Apr 10, Spring 7 : 13 Apr to 24 Apr, Spring 8 : 24 Apr to 8 May, Spring 8 : 11 May to 25 May, Spring 9 : 25 May to 8 Jun, Summer 1: 8 Jun - 19 Jun

      Description

      I uploaded and released a new version (9.1.2) of ProtAnnot.

      However, when I try to install it, I am not able to.

      If I launch IGB (9.1.2 or 9.1.0) and then open the protannot page (https://apps.bioviz.org/apps/org.lorainelab.igb.protannot) the page does not show an "Install" button even though IGB is open and running. The other App pages do show the "Install" button, however.

      The IGB App Manager is also not allowing me to install the new version of the App. Weirdly, the correct App description is being shown in App Manager, however!

      Tip:

      See: https://bitbucket.org/lorainelab/integrated-genome-browser/src/master/plugins/AppStore/src/main/java/org/lorainelab/igb/appstore/IgbAppServerLauncher.java for details on how to connect to the IGB localhost port that is being used by App Store javascript.

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            ann.loraine Ann Loraine created issue -
            ann.loraine Ann Loraine made changes -
            Field Original Value New Value
            Epic Link IGBF-1388 [ 17463 ]
            Hide
            ann.loraine Ann Loraine added a comment -
            Show
            ann.loraine Ann Loraine added a comment - Links: ProtAnnot repo - https://bitbucket.org/lorainelab/protannot/src/master/ jar file uploaded to App Store for new release - https://bitbucket.org/lorainelab/protannot/downloads/protannot-9.1.2.jar
            Hide
            ann.loraine Ann Loraine added a comment -

            Possibly out-of-date documentation describing IGB "manageApp" endpoint:

            Show
            ann.loraine Ann Loraine added a comment - Possibly out-of-date documentation describing IGB "manageApp" endpoint: https://docs.google.com/document/d/1FZoZmN603b2bCVVjAU2gS5i8DKG5qutagwkvPQZ0T48/edit?usp=sharing
            Hide
            pooja.nikhare Pooja Nikhare (Inactive) added a comment -

            I tested on dev-appstore-2 , using the following :
            IGB installer: IGBF-2192 from Noor's Repo - https://bitbucket.org/noorzahara/integrated-genome-browser-local1/downloads/
            Protonot App versions: https://bitbucket.org/lorainelab/protannot/downloads/

            • I Submitted Protonot Apps 9.1.2 version. In IGB app manager I was able to see "Update" button and the latest App description was updated.
            • In app-store I could see an upgrade button.
            • After installing the Protonot latest app. Selected sym and tools -> start Protonot . The properties tab was automatically selected. After clicking outside of sym also kept the Properties tab selected (changes related to new app version).

            Same testing I did with IGB - master installer - https://bitbucket.org/lorainelab/integrated-genome-browser/downloads/
            The issues mentioned in the ticket persisted. I suppose the changes are required in IGB.

            Show
            pooja.nikhare Pooja Nikhare (Inactive) added a comment - I tested on dev-appstore-2 , using the following : IGB installer: IGBF-2192 from Noor's Repo - https://bitbucket.org/noorzahara/integrated-genome-browser-local1/downloads/ Protonot App versions: https://bitbucket.org/lorainelab/protannot/downloads/ I Submitted Protonot Apps 9.1.2 version. In IGB app manager I was able to see "Update" button and the latest App description was updated. In app-store I could see an upgrade button. After installing the Protonot latest app. Selected sym and tools -> start Protonot . The properties tab was automatically selected. After clicking outside of sym also kept the Properties tab selected (changes related to new app version). Same testing I did with IGB - master installer - https://bitbucket.org/lorainelab/integrated-genome-browser/downloads/ The issues mentioned in the ticket persisted. I suppose the changes are required in IGB.
            ann.loraine Ann Loraine made changes -
            Assignee Sameer Shanbhag [ sameer ] Pooja Nikhare [ pooja.nikhare ]
            Hide
            ann.loraine Ann Loraine added a comment - - edited

            Problem solved by merging PR mentioned in above comment.
            Doing bug fix release - IGB 9.1.4.

            Show
            ann.loraine Ann Loraine added a comment - - edited Problem solved by merging PR mentioned in above comment. Doing bug fix release - IGB 9.1.4.
            ann.loraine Ann Loraine made changes -
            Status To-Do [ 10305 ] In Progress [ 3 ]
            ann.loraine Ann Loraine made changes -
            Status In Progress [ 3 ] Needs 1st Level Review [ 10005 ]
            ann.loraine Ann Loraine made changes -
            Status Needs 1st Level Review [ 10005 ] First Level Review in Progress [ 10301 ]
            ann.loraine Ann Loraine made changes -
            Status First Level Review in Progress [ 10301 ] Ready for Pull Request [ 10304 ]
            ann.loraine Ann Loraine made changes -
            Status Ready for Pull Request [ 10304 ] Pull Request Submitted [ 10101 ]
            ann.loraine Ann Loraine made changes -
            Status Pull Request Submitted [ 10101 ] Reviewing Pull Request [ 10303 ]
            ann.loraine Ann Loraine made changes -
            Status Reviewing Pull Request [ 10303 ] Merged Needs Testing [ 10002 ]
            ann.loraine Ann Loraine made changes -
            Assignee Pooja Nikhare [ pooja.nikhare ]
            Hide
            ann.loraine Ann Loraine added a comment -

            In doing 9.1.4 release, noticed that Mac installers are no longer working.
            We are investigating.
            Testing this ticket should be postponed pending resolution of Mac installer issue. (See linked issues.)

            Show
            ann.loraine Ann Loraine added a comment - In doing 9.1.4 release, noticed that Mac installers are no longer working. We are investigating. Testing this ticket should be postponed pending resolution of Mac installer issue. (See linked issues.)
            ann.loraine Ann Loraine made changes -
            Epic Link IGBF-1388 [ 17463 ] IGBF-1908 [ 17998 ]
            ann.loraine Ann Loraine made changes -
            Link This issue is blocked by IGBF-2306 [ IGBF-2306 ]
            ann.loraine Ann Loraine made changes -
            Labels Advanced
            nfreese Nowlan Freese made changes -
            Sprint Spring 5 : 16 Mar to 27 Mar [ 90 ] Spring 5 : 16 Mar to 27 Mar, Spring 6 : 30 Mar to Apr 10 [ 90, 91 ]
            nfreese Nowlan Freese made changes -
            Rank Ranked higher
            ann.loraine Ann Loraine made changes -
            Sprint Spring 5 : 16 Mar to 27 Mar, Spring 6 : 30 Mar to Apr 10 [ 90, 91 ] Spring 5 : 16 Mar to 27 Mar, Spring 6 : 30 Mar to Apr 10, Spring 7 : 13 Apr to 24 Apr [ 90, 91, 92 ]
            ann.loraine Ann Loraine made changes -
            Rank Ranked higher
            ann.loraine Ann Loraine made changes -
            Sprint Spring 5 : 16 Mar to 27 Mar, Spring 6 : 30 Mar to Apr 10, Spring 7 : 13 Apr to 24 Apr [ 90, 91, 92 ] Spring 5 : 16 Mar to 27 Mar, Spring 6 : 30 Mar to Apr 10, Spring 7 : 13 Apr to 24 Apr, Spring 8 : 24 Apr to 8 May [ 90, 91, 92, 93 ]
            ann.loraine Ann Loraine made changes -
            Rank Ranked higher
            ann.loraine Ann Loraine made changes -
            Sprint Spring 5 : 16 Mar to 27 Mar, Spring 6 : 30 Mar to Apr 10, Spring 7 : 13 Apr to 24 Apr, Spring 8 : 24 Apr to 8 May [ 90, 91, 92, 93 ] Spring 5 : 16 Mar to 27 Mar, Spring 6 : 30 Mar to Apr 10, Spring 7 : 13 Apr to 24 Apr, Spring 8 : 24 Apr to 8 May, Spring 8 : 11 May to 25 May [ 90, 91, 92, 93, 94 ]
            ann.loraine Ann Loraine made changes -
            Rank Ranked higher
            ann.loraine Ann Loraine made changes -
            Sprint Spring 5 : 16 Mar to 27 Mar, Spring 6 : 30 Mar to Apr 10, Spring 7 : 13 Apr to 24 Apr, Spring 8 : 24 Apr to 8 May, Spring 8 : 11 May to 25 May [ 90, 91, 92, 93, 94 ] Spring 5 : 16 Mar to 27 Mar, Spring 6 : 30 Mar to Apr 10, Spring 7 : 13 Apr to 24 Apr, Spring 8 : 24 Apr to 8 May, Spring 8 : 11 May to 25 May, Spring 9 : 25 May to 8 Jun [ 90, 91, 92, 93, 94, 95 ]
            ann.loraine Ann Loraine made changes -
            Rank Ranked higher
            Hide
            ann.loraine Ann Loraine added a comment -

            Mac installers are working now. Ready for testing.

            Show
            ann.loraine Ann Loraine added a comment - Mac installers are working now. Ready for testing.
            ann.loraine Ann Loraine made changes -
            Sprint Spring 5 : 16 Mar to 27 Mar, Spring 6 : 30 Mar to Apr 10, Spring 7 : 13 Apr to 24 Apr, Spring 8 : 24 Apr to 8 May, Spring 8 : 11 May to 25 May, Spring 9 : 25 May to 8 Jun [ 90, 91, 92, 93, 94, 95 ] Spring 5 : 16 Mar to 27 Mar, Spring 6 : 30 Mar to Apr 10, Spring 7 : 13 Apr to 24 Apr, Spring 8 : 24 Apr to 8 May, Spring 8 : 11 May to 25 May, Spring 9 : 25 May to 8 Jun, Summer 1: 8 Jun - 19 Jun [ 90, 91, 92, 93, 94, 95, 96 ]
            ann.loraine Ann Loraine made changes -
            Rank Ranked higher
            pbadzuh Philip Badzuh (Inactive) made changes -
            Assignee Philip Badzuh [ pbadzuh ]
            pbadzuh Philip Badzuh (Inactive) made changes -
            Status Merged Needs Testing [ 10002 ] Post-merge Testing In Progress [ 10003 ]
            Hide
            pbadzuh Philip Badzuh (Inactive) added a comment -

            Using the latest IGB installer, built from the master branch, these are the testing results on macOS:

            • The 'install' button is available on the appstore for the protannot app
            • Clicking the above button successfully installs protannot in IGB
            • The app description shown in app manager matches that of appstore

            Moving to done

            Show
            pbadzuh Philip Badzuh (Inactive) added a comment - Using the latest IGB installer, built from the master branch, these are the testing results on macOS: The 'install' button is available on the appstore for the protannot app Clicking the above button successfully installs protannot in IGB The app description shown in app manager matches that of appstore Moving to done
            pbadzuh Philip Badzuh (Inactive) made changes -
            Resolution Done [ 10000 ]
            Status Post-merge Testing In Progress [ 10003 ] Closed [ 6 ]
            pbadzuh Philip Badzuh (Inactive) made changes -
            Assignee Philip Badzuh [ pbadzuh ] Noor Zahara [ noor91zahara ]

              People

              • Assignee:
                noor91zahara Noor Zahara (Inactive)
                Reporter:
                ann.loraine Ann Loraine
              • Votes:
                0 Vote for this issue
                Watchers:
                3 Start watching this issue

                Dates

                • Created:
                  Updated:
                  Resolved: