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  1. IGB
  2. IGBF-2416

Investigate debugging junit test files

        Details

        • Type: Task
        • Status: Closed (View Workflow)
        • Priority: Major
        • Resolution: Done
        • Affects Version/s: None
        • Fix Version/s: None
        • Labels:
          None

          Description

          Situation: While creating new junit test cases using Netbeans 8.2 and JDK 1.8.0_251 or 1.8.0_191 on Mac could not Debug Test File. When test file (tried on GFFParserTest.java) was right-clicked > Debug Test File the test results report No tests executed and breakpoints are ignored. Can execute tests on module Core - Genometry (Data Models) by right-clicking and selecting test. This will run through the junit tests, however it does not allow for debugging.

          This was also tested on a separate linux system that was able to debug test files from other projects. However, attempting to debug test files in the IGB project did not work.

          Task: Investigate why the test files cannot be tested or debugged individually.

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              nfreese Nowlan Freese created issue -
              nfreese Nowlan Freese made changes -
              Field Original Value New Value
              Epic Link IGBF-1531 [ 17617 ]
              nfreese Nowlan Freese made changes -
              Link This issue relates to IGBF-2406 [ IGBF-2406 ]
              ann.loraine Ann Loraine made changes -
              Rank Ranked higher
              ann.loraine Ann Loraine made changes -
              Sprint Summer 1: 8 Jun - 19 Jun [ 96 ] Summer 1: 8 Jun - 19 Jun, Summer 2: 22 Jun - 3 July [ 96, 97 ]
              ann.loraine Ann Loraine made changes -
              Rank Ranked higher
              ann.loraine Ann Loraine made changes -
              Assignee Chester Dias [ cdias1 ]
              ann.loraine Ann Loraine made changes -
              Assignee Chester Dias [ cdias1 ]
              cdias1 Chester Dias (Inactive) made changes -
              Assignee Chester Dias [ cdias1 ]
              cdias1 Chester Dias (Inactive) made changes -
              Status To-Do [ 10305 ] In Progress [ 3 ]
              cdias1 Chester Dias (Inactive) made changes -
              Story Points 2 1
              cdias1 Chester Dias (Inactive) made changes -
              Attachment During Debug of one file.png [ 14764 ]
              cdias1 Chester Dias (Inactive) made changes -
              Attachment Results of debugging single file.png [ 14765 ]
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              cdias1 Chester Dias (Inactive) added a comment - - edited

              Nowlan Freese I did some digging into the issue and finally got the results that we were looking for.
              ISSUE:
              The debugging or a single test of a file was not possible before however when the whole project was tested the tests ran perfectly.
              tests were showing as running but nothing was shown in the test execution tab.
              Root Cause:
              I think this has something to do with the latest surefire plugin version.
              Solution:
              use version 2.22.2 in pom.xml

              <plugin>
                <groupId>org.apache.maven.plugins</groupId>
                <artifactId>maven-surefire-plugin</artifactId>
                <version>2.22.2</version>
 </plugin>
              Show
              cdias1 Chester Dias (Inactive) added a comment - - edited Nowlan Freese I did some digging into the issue and finally got the results that we were looking for. ISSUE: The debugging or a single test of a file was not possible before however when the whole project was tested the tests ran perfectly. tests were showing as running but nothing was shown in the test execution tab. Root Cause: I think this has something to do with the latest surefire plugin version. Solution: use version 2.22.2 in pom.xml <plugin> <groupId>org.apache.maven.plugins</groupId> <artifactId>maven-surefire-plugin</artifactId> <version>2.22.2</version> </plugin>
              cdias1 Chester Dias (Inactive) made changes -
              Status In Progress [ 3 ] Needs 1st Level Review [ 10005 ]
              cdias1 Chester Dias (Inactive) made changes -
              Assignee Chester Dias [ cdias1 ] Nowlan Freese [ nfreese ]
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              ann.loraine Ann Loraine added a comment -

              Thanks Chester Dias !

              Show
              ann.loraine Ann Loraine added a comment - Thanks Chester Dias !
              nfreese Nowlan Freese made changes -
              Status Needs 1st Level Review [ 10005 ] First Level Review in Progress [ 10301 ]
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              cdias1 Chester Dias (Inactive) added a comment -

              Note on test File names
              All file names have to be ending with *Test.java
              Example: GFFParserTest.java

              Further, as an extension to this, I suggest the use of a fixed version on the rest of the plugins and if possible on dependencies.
              The latest Version can have below issues.
              During testing, if the version is not specified, it will pick up the latest version, and if just before deployment a newer version appears in Nexus. The testing won't highlight the issues of the newer plugin/dependency that is used during deployment. This makes the test invalid.

              Issues like this have occurred before with the latest versions of plugins being unstable.

              Show
              cdias1 Chester Dias (Inactive) added a comment - Note on test File names All file names have to be ending with *Test.java Example: GFFParserTest.java Further, as an extension to this, I suggest the use of a fixed version on the rest of the plugins and if possible on dependencies. The latest Version can have below issues. During testing, if the version is not specified, it will pick up the latest version, and if just before deployment a newer version appears in Nexus. The testing won't highlight the issues of the newer plugin/dependency that is used during deployment. This makes the test invalid. Issues like this have occurred before with the latest versions of plugins being unstable.
              nfreese Nowlan Freese made changes -
              Status First Level Review in Progress [ 10301 ] Ready for Pull Request [ 10304 ]
              nfreese Nowlan Freese made changes -
              Assignee Nowlan Freese [ nfreese ] Chester Dias [ cdias1 ]
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              nfreese Nowlan Freese added a comment -

              Changed the version of the surefire plugin to 2.22.2 within the igb project pom.

              Can now run tests on individual test files, and can run debugger.

              Chester Dias can you create a branch and submit your changes for a pull request?

              Thanks

              Show
              nfreese Nowlan Freese added a comment - Changed the version of the surefire plugin to 2.22.2 within the igb project pom. Can now run tests on individual test files, and can run debugger. Chester Dias can you create a branch and submit your changes for a pull request? Thanks
              Hide
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              cdias1 Chester Dias (Inactive) added a comment -

              PR:https://bitbucket.org/lorainelab/integrated-genome-browser/pull-requests/802/igbf-2416-added-surefire-plugin-version-to/diff

              Show
              cdias1 Chester Dias (Inactive) added a comment - PR: https://bitbucket.org/lorainelab/integrated-genome-browser/pull-requests/802/igbf-2416-added-surefire-plugin-version-to/diff
              cdias1 Chester Dias (Inactive) made changes -
              Status Ready for Pull Request [ 10304 ] Pull Request Submitted [ 10101 ]
              cdias1 Chester Dias (Inactive) made changes -
              Assignee Chester Dias [ cdias1 ] Nowlan Freese [ nfreese ]
              nfreese Nowlan Freese made changes -
              Assignee Nowlan Freese [ nfreese ] Ann Loraine [ aloraine ]
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              ann.loraine Ann Loraine added a comment -

              Merged.

              Show
              ann.loraine Ann Loraine added a comment - Merged.
              nfreese Nowlan Freese made changes -
              Status Pull Request Submitted [ 10101 ] Reviewing Pull Request [ 10303 ]
              nfreese Nowlan Freese made changes -
              Status Reviewing Pull Request [ 10303 ] Merged Needs Testing [ 10002 ]
              nfreese Nowlan Freese made changes -
              Assignee Ann Loraine [ aloraine ]
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              nfreese Nowlan Freese added a comment -

              Pulled master. Tested by running tests on individual test files and setting break points with debugger. Working correctly.

              Closing issue.

              Show
              nfreese Nowlan Freese added a comment - Pulled master. Tested by running tests on individual test files and setting break points with debugger. Working correctly. Closing issue.
              nfreese Nowlan Freese made changes -
              Status Merged Needs Testing [ 10002 ] Post-merge Testing In Progress [ 10003 ]
              nfreese Nowlan Freese made changes -
              Resolution Done [ 10000 ]
              Status Post-merge Testing In Progress [ 10003 ] Closed [ 6 ]

                People

                • Assignee:
                  Unassigned
                  Reporter:
                  nfreese Nowlan Freese
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                  Dates

                  • Created:
                    Updated:
                    Resolved: