Details
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Type:
Task
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Status: Closed (View Workflow)
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Priority:
Blocker
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Resolution: Done
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Affects Version/s: None
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Fix Version/s: None
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Labels:None
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Story Points:2
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Epic Link:
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Sprint:Summer 2: 22 Jun - 3 Jul
Description
Situation: When a user clicks View in IGB for data at usegalaxy.org a url is created and the user is directed to bioviz where javascript alters the url allowing data to be streamed to IGB. Currently, when clicking View in IGB at usegalaxy.org the page responds with "This site can't be reached".
Example data: https://usegalaxy.org/u/nfreese/h/visualization-of-whole-genome-dna-methylation-data-in-igb-focus-on-a-feature
Task: Determine the problem and implement a solution so that data are sent to IGB.
Attachments
Activity
| Field | Original Value | New Value |
|---|---|---|
| Epic Link | IGBF-1880 [ 17970 ] |
| Priority | Major [ 3 ] | Blocker [ 1 ] |
| Description |
Situation: When a user clicks View in IGB for data at usegalaxy.org a url is created and the user is directed to bioviz where javascript alters the url allowing data to be streamed to IGB. Currently, when clicking View in IGB at usegalaxy.org the page responds with "This site can't be reached".
Example data: https://usegalaxy.org/u/nfreese/h/visualization-of-whole-genome-dna-methylation-data-in-igb-focus-on-a-feature The url that is eventually created and sent to IGB looks like this as an example: http://127.0.0.1:7085/IGBControl? version=H_sapiens_Dec_2013& loadresidues=false& cyverse_data=true& feature_url_0=https://data.cyverse.org/dav-anon/iplant/home/nowlanf/SmokeTesting/H_sapiens_Dec_2013/BedGraph_HomoSapien_noName_NowlanTEST.bedGraph& sym_method_0=https://data.cyverse.org/dav-anon/iplant/home/nowlanf/SmokeTesting/H_sapiens_Dec_2013/BedGraph_HomoSapien_noName_NowlanTEST.bedGraph& sym_col_0=0x00FFFF& sym_bg_0=0x000000& sym_name_0=RefSeqCurated& query_url=https://data.cyverse.org/dav-anon/iplant/home/nowlanf/SmokeTesting/H_sapiens_Dec_2013/BedGraph_HomoSapien_noName_NowlanTEST.bedGraph& server_url=cyverse Task: Determine the problem and implement a solution so that data are sent to IGB. |
Situation: When a user clicks View in IGB for data at usegalaxy.org a url is created and the user is directed to bioviz where javascript alters the url allowing data to be streamed to IGB. Currently, when clicking View in IGB at usegalaxy.org the page responds with "This site can't be reached".
Example data: https://usegalaxy.org/u/nfreese/h/visualization-of-whole-genome-dna-methylation-data-in-igb-focus-on-a-feature Task: Determine the problem and implement a solution so that data are sent to IGB. |
| Status | To-Do [ 10305 ] | In Progress [ 3 ] |
| Status | In Progress [ 3 ] | Needs 1st Level Review [ 10005 ] |
| Link | This issue relates to IGBF-2458 [ IGBF-2458 ] |
| Status | Needs 1st Level Review [ 10005 ] | First Level Review in Progress [ 10301 ] |
| Status | First Level Review in Progress [ 10301 ] | Ready for Pull Request [ 10304 ] |
| Status | Ready for Pull Request [ 10304 ] | Pull Request Submitted [ 10101 ] |
| Status | Pull Request Submitted [ 10101 ] | Reviewing Pull Request [ 10303 ] |
| Status | Reviewing Pull Request [ 10303 ] | Merged Needs Testing [ 10002 ] |
| Status | Merged Needs Testing [ 10002 ] | Post-merge Testing In Progress [ 10003 ] |
| Resolution | Done [ 10000 ] | |
| Status | Post-merge Testing In Progress [ 10003 ] | Closed [ 6 ] |