Uploaded image for project: 'IGB'
  1. IGB
  2. IGBF-2782

Create Plugin - create Graph from annotation score

    Details

    • Type: New Plugin
    • Status: To-Do (View Workflow)
    • Priority: Major
    • Resolution: Unresolved
    • Affects Version/s: None
    • Fix Version/s: None
    • Labels:
      None

      Description

      Situation: Annotations such as bed files contain a score value in the 5th column. Track Operations can currently be used to create a graph file from an annotation. This new plugin would create a new Track Operation that would create a graph using the score value of the annotation. For example, if the annotation had a score of 5 at base position 100, then the graph would have a value of 5 at base position 100. If two annotations overlap at a single base point, one annotation has a score of 10 at base position 200 and a second annotation has a score of 20 at base position 200, then the average score of the two annotations would be used as the value for the graph at base position 200.

      Task: Create the Track Operation plugin "Score Graph"

        Attachments

          Activity

            People

            • Assignee:
              Unassigned
              Reporter:
              nfreese Nowlan Freese
            • Votes:
              0 Vote for this issue
              Watchers:
              1 Start watching this issue

              Dates

              • Created:
                Updated: