Details
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Type:
Bug
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Status: Closed (View Workflow)
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Priority:
Blocker
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Resolution: Done
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Affects Version/s: None
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Fix Version/s: None
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Labels:None
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Story Points:0.25
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Epic Link:
-
Sprint:Winter 6 Mar 8 - Mar 19
Description
When running playbook (commit 65d1cbe "Start using migration to create database tables")
the following error occurred:
TASK [migrate : set_fact] ****************************************************************************************
ok: [3.216.236.83]
TASK [migrate : Make migrations] *********************************************************************************
fatal: [3.216.236.83]: FAILED! => changed=false
cmd: ./manage.py makemigrations bioviz-connect
msg: '[Errno 13] Permission denied: b''./manage.py'''
rc: 13
PLAY RECAP *******************************************************************************************************
3.216.236.83 : ok=39 changed=7 unreachable=0 failed=1 skipped=2 rescued=0 ignored=0
See attached inventory.
Playbooks repository: https://bitbucket.org/lorainelab/bioviz-connect-playbooks/src/master/
Attachments
Issue Links
- relates to
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IGBF-2576 Initialize DE user workspace on login
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- Closed
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Activity
| Field | Original Value | New Value |
|---|---|---|
| Description |
When running playbook, this error occurred:
{code} TASK [migrate : set_fact] **************************************************************************************** ok: [3.216.236.83] TASK [migrate : Make migrations] ********************************************************************************* fatal: [3.216.236.83]: FAILED! => changed=false cmd: ./manage.py makemigrations bioviz-connect msg: '[Errno 13] Permission denied: b''./manage.py''' rc: 13 PLAY RECAP ******************************************************************************************************* 3.216.236.83 : ok=39 changed=7 unreachable=0 failed=1 skipped=2 rescued=0 ignored=0 {code} See attached inventory. |
When running playbook (commit 65d1cbe "Start using migration to create database tables")
the following error occurred: {code} TASK [migrate : set_fact] **************************************************************************************** ok: [3.216.236.83] TASK [migrate : Make migrations] ********************************************************************************* fatal: [3.216.236.83]: FAILED! => changed=false cmd: ./manage.py makemigrations bioviz-connect msg: '[Errno 13] Permission denied: b''./manage.py''' rc: 13 PLAY RECAP ******************************************************************************************************* 3.216.236.83 : ok=39 changed=7 unreachable=0 failed=1 skipped=2 rescued=0 ignored=0 {code} See attached inventory. |
| Description |
When running playbook (commit 65d1cbe "Start using migration to create database tables")
the following error occurred: {code} TASK [migrate : set_fact] **************************************************************************************** ok: [3.216.236.83] TASK [migrate : Make migrations] ********************************************************************************* fatal: [3.216.236.83]: FAILED! => changed=false cmd: ./manage.py makemigrations bioviz-connect msg: '[Errno 13] Permission denied: b''./manage.py''' rc: 13 PLAY RECAP ******************************************************************************************************* 3.216.236.83 : ok=39 changed=7 unreachable=0 failed=1 skipped=2 rescued=0 ignored=0 {code} See attached inventory. |
When running playbook (commit 65d1cbe "Start using migration to create database tables")
the following error occurred: {code} TASK [migrate : set_fact] **************************************************************************************** ok: [3.216.236.83] TASK [migrate : Make migrations] ********************************************************************************* fatal: [3.216.236.83]: FAILED! => changed=false cmd: ./manage.py makemigrations bioviz-connect msg: '[Errno 13] Permission denied: b''./manage.py''' rc: 13 PLAY RECAP ******************************************************************************************************* 3.216.236.83 : ok=39 changed=7 unreachable=0 failed=1 skipped=2 rescued=0 ignored=0 {code} See attached inventory. Playbooks repository: https://bitbucket.org/lorainelab/bioviz-connect-playbooks/src/master/ |
| Priority | Major [ 3 ] | Blocker [ 1 ] |
| Attachment | inv.ini [ 15493 ] |
| Sprint | Winter 6 Mar 8 - Mar 19 [ 116 ] |
| Rank | Ranked higher |
| Epic Link | IGBF-2376 [ 18533 ] |
| Status | To-Do [ 10305 ] | In Progress [ 3 ] |
| Status | In Progress [ 3 ] | Needs 1st Level Review [ 10005 ] |
| Assignee | Chester Dias [ cdias1 ] | Ann Loraine [ aloraine ] |
| Status | Needs 1st Level Review [ 10005 ] | First Level Review in Progress [ 10301 ] |
| Status | First Level Review in Progress [ 10301 ] | Ready for Pull Request [ 10304 ] |
| Assignee | Ann Loraine [ aloraine ] | Chester Dias [ cdias1 ] |
Looks good. Please submit PR when ready.
| Status | Ready for Pull Request [ 10304 ] | Pull Request Submitted [ 10101 ] |
| Status | Pull Request Submitted [ 10101 ] | Reviewing Pull Request [ 10303 ] |
| Status | Reviewing Pull Request [ 10303 ] | Merged Needs Testing [ 10002 ] |
| Assignee | Chester Dias [ cdias1 ] |
| Attachment | inv2.ini [ 15505 ] |
| Attachment | inv2.ini [ 15505 ] |
| Attachment | inv2.ini [ 15506 ] |
| Status | Merged Needs Testing [ 10002 ] | Post-merge Testing In Progress [ 10003 ] |
| Status | Post-merge Testing In Progress [ 10003 ] | To-Do [ 10305 ] |
| Assignee | Chester Dias [ cdias1 ] |
| Status | To-Do [ 10305 ] | In Progress [ 3 ] |
| Status | In Progress [ 3 ] | Needs 1st Level Review [ 10005 ] |
| Status | Needs 1st Level Review [ 10005 ] | First Level Review in Progress [ 10301 ] |
| Status | First Level Review in Progress [ 10301 ] | Ready for Pull Request [ 10304 ] |
| Status | Ready for Pull Request [ 10304 ] | Pull Request Submitted [ 10101 ] |
| Status | Pull Request Submitted [ 10101 ] | Reviewing Pull Request [ 10303 ] |
| Status | Reviewing Pull Request [ 10303 ] | Merged Needs Testing [ 10002 ] |
| Status | Merged Needs Testing [ 10002 ] | Post-merge Testing In Progress [ 10003 ] |
| Assignee | Chester Dias [ cdias1 ] | Ann Loraine [ aloraine ] |
| Attachment | inv2.ini [ 15506 ] |
| Comment |
[ Error persists:
{code} TASK [migrate : Make migrations] *********************************************** fatal: [54.91.204.15]: FAILED! => changed=false cmd: ./manage.py makemigrations bioviz-connect msg: '[Errno 13] Permission denied: b''./manage.py''' rc: 13 PLAY RECAP ********************************************************************* 54.91.204.15 : ok=39 changed=6 unreachable=0 failed=1 skipped=2 rescued=0 ignored=0 {code} See attached file inv2.ini for host tested. ] |
Permissions error is still present.
I tested playbook setup.yml on an entirely new host as well as on existing hosts that had previously been running bioviz-connect.
Chester Dias: Can you check?
Also note that master branch has some updates. I don't think they would affect the above bug, but do please review just to be sure.
inv8.ini - an entirely new host that has never run bioviz-connect
inv3.ini - previously was running bioviz-connect
errors observed:
running: ansible-playbook -i inv8.ini setup.yml
TASK [migrate : Make migrations] ********************************************************************************************************************
fatal: [bvctest8]: FAILED! => changed=false
cmd: ./manage.py makemigrations bioviz-connect
msg: '[Errno 13] Permission denied: b''./manage.py'''
rc: 13
and
running: ansible-playbook -i inv3.ini setup.yml
TASK [migrate : Make migrations] ********************************************************************************************************************
fatal: [bvctest3]: FAILED! => changed=false
cmd: ./manage.py makemigrations bioviz-connect
msg: '[Errno 13] Permission denied: b''./manage.py'''
rc: 13
| Status | Post-merge Testing In Progress [ 10003 ] | To-Do [ 10305 ] |
| Assignee | Ann Loraine [ aloraine ] | Chester Dias [ cdias1 ] |
| Status | To-Do [ 10305 ] | In Progress [ 3 ] |
Cause of error
Database users and the database itself was not created
Please Review: https://bitbucket.org/chesterdias/chester-local-bioviz-connect-playbooks/branch/IGBF-2818#diff
| Status | In Progress [ 3 ] | Needs 1st Level Review [ 10005 ] |
| Assignee | Chester Dias [ cdias1 ] | Ann Loraine [ aloraine ] |
| Status | Needs 1st Level Review [ 10005 ] | First Level Review in Progress [ 10301 ] |
| Status | First Level Review in Progress [ 10301 ] | Ready for Pull Request [ 10304 ] |
| Assignee | Ann Loraine [ aloraine ] | Chester Dias [ cdias1 ] |
Please submit PR when ready.
| Status | Ready for Pull Request [ 10304 ] | Pull Request Submitted [ 10101 ] |
| Assignee | Chester Dias [ cdias1 ] | Ann Loraine [ aloraine ] |
| Status | Pull Request Submitted [ 10101 ] | Reviewing Pull Request [ 10303 ] |
| Status | Reviewing Pull Request [ 10303 ] | Merged Needs Testing [ 10002 ] |
| Assignee | Ann Loraine [ aloraine ] |
| Assignee | Ann Loraine [ aloraine ] |
| Status | Merged Needs Testing [ 10002 ] | Post-merge Testing In Progress [ 10003 ] |
testing results:
The same error is observed.
ASK [settings : settings.ini] ********************************************************************************** changed: [bvctest3] TASK [mysql : Drop Database] ************************************************************************************ changed: [bvctest3] TASK [mysql : Create a new database] **************************************************************************** changed: [bvctest3] TASK [mysql : Create database user] ***************************************************************************** ok: [bvctest3] TASK [migrate : set_fact] *************************************************************************************** ok: [bvctest3] TASK [migrate : set_fact] *************************************************************************************** ok: [bvctest3] TASK [migrate : set_fact] *************************************************************************************** ok: [bvctest3] TASK [migrate : Make migrations] ******************************************************************************** fatal: [bvctest3]: FAILED! => changed=false cmd: ./manage.py makemigrations bioviz-connect msg: '[Errno 13] Permission denied: b''./manage.py''' rc: 13 PLAY RECAP ****************************************************************************************************** bvctest3 : ok=42 changed=7 unreachable=0 failed=1 skipped=2 rescued=0 ignored=0
| Status | Post-merge Testing In Progress [ 10003 ] | To-Do [ 10305 ] |
| Assignee | Ann Loraine [ aloraine ] | Chester Dias [ cdias1 ] |
| Status | To-Do [ 10305 ] | In Progress [ 3 ] |
| Status | In Progress [ 3 ] | Needs 1st Level Review [ 10005 ] |
| Assignee | Chester Dias [ cdias1 ] | Ann Loraine [ aloraine ] |
| Status | Needs 1st Level Review [ 10005 ] | First Level Review in Progress [ 10301 ] |
| Status | First Level Review in Progress [ 10301 ] | Ready for Pull Request [ 10304 ] |
| Status | Ready for Pull Request [ 10304 ] | Pull Request Submitted [ 10101 ] |
| Status | Pull Request Submitted [ 10101 ] | Reviewing Pull Request [ 10303 ] |
| Status | Reviewing Pull Request [ 10303 ] | Merged Needs Testing [ 10002 ] |
| Status | Merged Needs Testing [ 10002 ] | Post-merge Testing In Progress [ 10003 ] |
| Resolution | Done [ 10000 ] | |
| Status | Post-merge Testing In Progress [ 10003 ] | Closed [ 6 ] |
| Assignee | Ann Loraine [ aloraine ] | Chester Dias [ cdias1 ] |
The issue seems to be due to an incorrect permission level to the folder. [CHMOD permissions are set to rw only]. I tried running the migration command manually, gave the same error. Investigating caused of the error