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  1. IGB
  2. IGBF-2877

Create annot.xml file from track hub's trackDb.txt file

    Details

    • Type: Task
    • Status: Closed (View Workflow)
    • Priority: Major
    • Resolution: Done
    • Affects Version/s: None
    • Fix Version/s: None
    • Labels:
    • Story Points:
      1
    • Sprint:
      Spring 6 2021 May 31 - June 11, Summer 1 2021 Jun 14 - Jun 25, Summer 2 2021 Jun 28 - Jul 9

      Description

      We just need name parameter from trackDb.txt file. In future we might extract more information from trackDb.txt file like color. We can get the location of trackhubDB.txt file from the following API https://api.genome.ucsc.edu/list/hubGenomes?hubUrl=http://hgdownload.soe.ucsc.edu/hubs/mouseStrains/hub.txt

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              • Assignee:
                chirag24 Chirag Chandrahas Shetty (Inactive)
                Reporter:
                chirag24 Chirag Chandrahas Shetty (Inactive)
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                • Created:
                  Updated:
                  Resolved: