Details
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Type: Improvement
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Status: Closed (View Workflow)
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Priority: Major
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Resolution: Done
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Affects Version/s: None
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Fix Version/s: 9.1.10 Major Release
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Labels:None
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Story Points:0.5
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Epic Link:
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Sprint:Fall 1 2021 Aug 16 - Aug 27, Fall 2 2021 Aug 30 - Sep10, Fall 3 2021 Sep 13 - Sep 24
Description
The JASPAR TFBS track hub appears to have data for the Arabidopsis thaliana genome, but uses a name that IGB does not currently recognize: "araTha1".
For this task, we need to figure out what the corresponding IGB name is and add it to IGB's synonyms system, or provide the synonym within the track hub synonyms endpoint.
(See attached image.)
Attachments
Issue Links
- relates to
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IGBF-2954 Investigate: why is loading bb (bigbed) and bigwig (bw) files so slow?
- Closed
Recommend looking at synonyms.txt in IGB.
attn: Nowlan Freese