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  1. IGB
  2. IGBF-2943

Investigate recent literature on compendium databases with RNA-Seq

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        • Type: Task
        • Status: Closed (View Workflow)
        • Priority: Major
        • Resolution: Done
        • Affects Version/s: None
        • Fix Version/s: None
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          Description

          Find five "top papers" (much-cited, influential) in which authors have developed compendium data with RNA-Seq data, focusing on bulk RNA-Seq primarily.

          Question: Do any sites provide a REST endpoint that is easy to use and enables import of "raw" counts or other type of expression value into interactive computational environments such as RStudio or Jupyter notebooks?

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              Task - A task that needs to be done. IGBF-2966 Investigate rice RNA-Seq paper and data

              • Major - Major loss of function.
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                  • Assignee:
                    nfreese Nowlan Freese
                    Reporter:
                    ann.loraine Ann Loraine
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