Details
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Type:
Task
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Status: Closed (View Workflow)
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Priority:
Major
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Resolution: Done
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Affects Version/s: None
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Fix Version/s: None
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Labels:None
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Story Points:0.5
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Epic Link:
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Sprint:Fall 4 2021 Sep 27 - Oct 8
Description
Situation: Yiping Qi's group has identified a paper with rice protoplast single cell RNA-Seq data here. They would like us to investigate the data and see if we can use it to determine lowly expressed genes in rice sheath tissue from protoplasts.
Task: Read through the paper and identify the data sources containing the sequence files. Also see if they have gene counts tables available.
Attachments
Issue Links
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- Closed
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Activity
| Field | Original Value | New Value |
|---|---|---|
| Epic Link |
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| Description |
Situation: Yiping Qi's group has identified a paper with rice protoplast single cell RNA-Seq data[here|https://pubmed.ncbi.nlm.nih.gov/34340913/]. They would like us to investigate the data and see if we can use it to determine lowly expressed genes in rice sheath tissue from protoplasts.
Task: Read through the paper and identify the data sources containing the sequence files. Also see if they have gene counts tables available. |
Situation: Yiping Qi's group has identified a paper with rice protoplast single cell RNA-Seq data [here|https://pubmed.ncbi.nlm.nih.gov/34340913/]. They would like us to investigate the data and see if we can use it to determine lowly expressed genes in rice sheath tissue from protoplasts.
Task: Read through the paper and identify the data sources containing the sequence files. Also see if they have gene counts tables available. |
| Status | To-Do [ 10305 ] | In Progress [ 3 ] |
| Status | In Progress [ 3 ] | Needs 1st Level Review [ 10005 ] |
| Status | Needs 1st Level Review [ 10005 ] | First Level Review in Progress [ 10301 ] |
| Status | First Level Review in Progress [ 10301 ] | Ready for Pull Request [ 10304 ] |
| Status | Ready for Pull Request [ 10304 ] | Pull Request Submitted [ 10101 ] |
| Status | Pull Request Submitted [ 10101 ] | Reviewing Pull Request [ 10303 ] |
| Status | Reviewing Pull Request [ 10303 ] | Merged Needs Testing [ 10002 ] |
| Status | Merged Needs Testing [ 10002 ] | Post-merge Testing In Progress [ 10003 ] |
| Resolution | Done [ 10000 ] | |
| Status | Post-merge Testing In Progress [ 10003 ] | Closed [ 6 ] |
| Link | This issue relates to IGBF-3020 [ IGBF-3020 ] |