Details

    • Story Points:
      4
    • Sprint:
      Fall 6 2021 Oct 25 - Nov 5, Fall 7 2021 Nov 8 - Nov 24, Fall 8 2021 Nov 29 - Dec 10, Fall 9 2021 Dec 13 - Dec 24, Spring 1 2022 Jan 3 - Jan 14

      Description

      Situation: bigBed is an indexed binary format of bed files. However, in IGB, bigBed files are not appearing correctly. The bigBed gene annotations (see attached file) are not showing the introns/exons, but instead are drawing a single glyph for the entire gene.

      Task: Fix IGB so that the bigBed files appear correctly.

      See the UCSC guide on bigBed for more information on the bigBed file format.

        Attachments

        1. Araport11.bb
          3.14 MB
        2. bbVSbed.png
          bbVSbed.png
          149 kB
        3. bed.png
          bed.png
          195 kB
        4. bed and bb.png
          bed and bb.png
          80 kB
        5. bedDetail.as
          0.9 kB
        6. chrom.sizes
          0.1 kB

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              • Assignee:
                nfreese Nowlan Freese
                Reporter:
                nfreese Nowlan Freese
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                • Created:
                  Updated:
                  Resolved: