Details
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Type:
Task
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Status: Closed (View Workflow)
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Priority:
Major
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Resolution: Done
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Affects Version/s: None
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Fix Version/s: None
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Labels:None
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Story Points:2
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Epic Link:
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Sprint:Fall 6 2021 Oct 25 - Nov 5, Fall 7 2021 Nov 8 - Nov 24
Description
Identify differentially expressed genes.
Goals:
- Identify DE genes within a genotype between treatment and control
- Identify genes with treatment responses that differ across genotypes (genotype by treatment interaction)
- Identify genes differentially expressed between are and VF36 genotypes
Create Markdowns documenting code and results.
Attachments
Activity
| Field | Original Value | New Value |
|---|---|---|
| Epic Link | IGBF-2993 [ 21429 ] |
| Summary | Compare gene expression across treatment and control samples | Compare gene expression |
| Description |
Identify differentially expressed genes across treatments.
Two goals: * Identify DE genes within a genotype * Identify genes with responses that differ across genotypes (genotype by treatment interaction) Create Markdowns documenting code and results. |
Identify differentially expressed genes.
Goals: * Identify DE genes within a genotype between treatment and control * Identify genes with treatment responses that differ across genotypes (genotype by treatment interaction) * Identify genes differentially expressed between are and VF36 genotypes Create Markdowns documenting code and results. |
| Sprint | Fall 6 2021 Oct 25 - Nov 5 [ 132 ] | Fall 6 2021 Oct 25 - Nov 5, Fall 7 2021 Nov 8 - Nov 19 [ 132, 133 ] |
| Rank | Ranked higher |
| Rank | Ranked lower |
| Status | To-Do [ 10305 ] | In Progress [ 3 ] |
| Status | In Progress [ 3 ] | Needs 1st Level Review [ 10005 ] |
| Status | Needs 1st Level Review [ 10005 ] | First Level Review in Progress [ 10301 ] |
| Status | First Level Review in Progress [ 10301 ] | Ready for Pull Request [ 10304 ] |
| Status | Ready for Pull Request [ 10304 ] | Pull Request Submitted [ 10101 ] |
| Status | Pull Request Submitted [ 10101 ] | Reviewing Pull Request [ 10303 ] |
| Status | Reviewing Pull Request [ 10303 ] | Merged Needs Testing [ 10002 ] |
| Status | Merged Needs Testing [ 10002 ] | Post-merge Testing In Progress [ 10003 ] |
| Resolution | Done [ 10000 ] | |
| Status | Post-merge Testing In Progress [ 10003 ] | Closed [ 6 ] |
| Assignee | Ann Loraine [ aloraine ] |