Details
-
Type:
Task
-
Status: Closed (View Workflow)
-
Priority:
Major
-
Resolution: Done
-
Affects Version/s: None
-
Fix Version/s: None
-
Labels:None
-
Story Points:1
-
Epic Link:
-
Sprint:Summer 4 2022 July 4
Description
https://www.nature.com/articles/s41586-022-04808-9
Called SL5.0, it includes gene model annotations that document / predict alternative splicing forms.
For this task, obtain the sequence and annotations and add them to IGB Quickload as a new version of the tomato genome.
Data:
- data directory: https://solgenomics.net/ftp/genomes/TGG/
- gene models: https://solgenomics.net/ftp/genomes/TGG/gff/SL5.0.gff3.gz
- genome assembly sequence: https://solgenomics.net/ftp/genomes/TGG/genome/SL5.0.fasta.gz
