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  1. IGB
  2. IGBF-3230

Visualize alternative splicing events

        Details

        • Type: Task
        • Status: Closed (View Workflow)
        • Priority: Major
        • Resolution: Done
        • Affects Version/s: None
        • Fix Version/s: None
        • Labels:
          None
        • Story Points:
          1
        • Epic Link:
        • Sprint:
          Fall 7 2022 Nov 21, Fall 8 2022 Dec 5, Spring 1 2023 Dec 26, Spring 2 2023 Jan 16

          Description

          Create images showing RNA-Seq alignment alternative splicing evidence and differential gene expression between anther and pollen tube tissue types and also between desiccation stress and no desiccation stress samples.

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              is blocked by

              Task - A task that needs to be done. IGBF-3189 Annotate SL5 genes with RNA processing related functions

              • Major - Major loss of function.
              • Closed
              relates to

              Task - A task that needs to be done. IGBF-3144 Make annots.xml for RNA-Seq junction, alignment, and coverage graphs

              • Major - Major loss of function.
              • Closed

                Activity

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                ann.loraine Ann Loraine added a comment -

                Data are deployed to IGB Quickload sites and multiple images added to repository. Moving to Done.

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                ann.loraine Ann Loraine added a comment - Data are deployed to IGB Quickload sites and multiple images added to repository. Moving to Done.
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                ann.loraine Ann Loraine added a comment - - edited

                Added IGB images on a branch, merged into main.

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                ann.loraine Ann Loraine added a comment - - edited Added IGB images on a branch, merged into main.

                  People

                  • Assignee:
                    ann.loraine Ann Loraine
                    Reporter:
                    ann.loraine Ann Loraine
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                    Dates

                    • Created:
                      Updated:
                      Resolved: