Details
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Type:
Task
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Status: Closed (View Workflow)
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Priority:
Major
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Resolution: Done
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Affects Version/s: None
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Fix Version/s: None
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Labels:
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Story Points:1
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Epic Link:
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Sprint:Spring 4 2023 Feb 21, Spring 5 2023 Mar 6
Description
[~aloraine] agreed to review an article that describes a new iteration of "CHESS" annotations for human genome. Review is due 19 Feb 2023. Article info:
- Web site with annotations: http://ccb.jhu.edu/chess/
- Article draft on BioRxiv: https://www.biorxiv.org/content/10.1101/2022.12.21.521274v1
Preliminary scan of the article shows that these new annotations could be very useful for understanding human transcriptome, so this task also includes deploying the annotations into IGB Quickload site.
Proposed strategy for reviewing this work:
- Try to deploy the annotations onto an IGB Quickload site
- If that goes well, use IGB to make interesting and/or artistic screen shots of genomic scenes showing the CHESS data
- Submit a review that describes observations made
Possible benefits of proposed strategy:
- Helps bioinformatics scientists by pointing out a useful dataset or helping to improve a work in progress
- Try out a possible new use case for IGB (dataset review tool?)
- Provide access to possibly very useful gene models that can benefit our field, and others
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