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  1. IGB
  2. IGBF-3279

Muday-144 Analysis of DE genes

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        • Type: Task
        • Status: Closed (View Workflow)
        • Priority: Major
        • Resolution: Done
        • Affects Version/s: None
        • Fix Version/s: None
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          Description

          2. I know that pipelines/analysis procedures evolve. Can you look at the analysis of DE genes with temperature within each genotype and make sure we have a final set of data. This is pertinent to compare with number 3! I think we decided that IQR 50 was the best metric

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              Task - A task that needs to be done. IGBF-3281 Muday-144 DE analysis & Volcano Plots

              • Major - Major loss of function.
              • Closed

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                Mdavis4290 Molly Davis created issue -
                Mdavis4290 Molly Davis made changes -
                Field Original Value New Value
                Epic Link IGBF-3277 [ 22158 ]
                Mdavis4290 Molly Davis made changes -
                Link This issue is blocked by IGBF-3280 [ IGBF-3280 ]
                Mdavis4290 Molly Davis made changes -
                Summary Analysis of DE genes Muday-144 Analysis of DE genes
                Mdavis4290 Molly Davis made changes -
                Link This issue is blocked by IGBF-3281 [ IGBF-3281 ]
                Mdavis4290 Molly Davis made changes -
                Link This issue is blocked by IGBF-3282 [ IGBF-3282 ]
                ann.loraine Ann Loraine made changes -
                Sprint Spring 4 2023 Feb 21 [ 164 ] Spring 4 2023 Feb 21, Spring 5 2023 Mar 6 [ 164, 165 ]
                ann.loraine Ann Loraine made changes -
                Rank Ranked higher
                Mdavis4290 Molly Davis made changes -
                Status To-Do [ 10305 ] In Progress [ 3 ]
                Mdavis4290 Molly Davis made changes -
                Status In Progress [ 3 ] To-Do [ 10305 ]
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                Mdavis4290 Molly Davis added a comment -

                Combined this ticket with IGBF-3281. Please reference that ticket to see final results.

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                Mdavis4290 Molly Davis added a comment - Combined this ticket with IGBF-3281 . Please reference that ticket to see final results.
                Mdavis4290 Molly Davis made changes -
                Status To-Do [ 10305 ] Pull Request Submitted [ 10101 ]
                Mdavis4290 Molly Davis made changes -
                Status Pull Request Submitted [ 10101 ] Reviewing Pull Request [ 10303 ]
                Mdavis4290 Molly Davis made changes -
                Status Reviewing Pull Request [ 10303 ] Merged Needs Testing [ 10002 ]
                Mdavis4290 Molly Davis made changes -
                Status Merged Needs Testing [ 10002 ] Post-merge Testing In Progress [ 10003 ]
                Mdavis4290 Molly Davis made changes -
                Resolution Done [ 10000 ]
                Status Post-merge Testing In Progress [ 10003 ] Closed [ 6 ]
                ann.loraine Ann Loraine made changes -
                Link This issue relates to IGBF-3295 [ IGBF-3295 ]

                  People

                  • Assignee:
                    Mdavis4290 Molly Davis
                    Reporter:
                    Mdavis4290 Molly Davis
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                    Dates

                    • Created:
                      Updated:
                      Resolved: