Uploaded image for project: 'IGB'
  1. IGB
  2. IGBF-3305

Investigate com.apple.laf osgi wiring package error

        Details

        • Type: Task
        • Status: Closed (View Workflow)
        • Priority: Major
        • Resolution: Done
        • Affects Version/s: None
        • Fix Version/s: None
        • Labels:
          None

          Description

          After updating the libraries and running IGB, some of the many errors that appear at runtime is an osgi wiring package error attributed to com.apple.laf as shown below.

          [main] ERROR com.affymetrix.main.OSGiHandler - Unable to resolve org.lorainelab.igb.bai [5](R 5.0): missing requirement [org.lorainelab.igb.bai [5](R 5.0)] osgi.wiring.package; (&(osgi.wiring.package=com.affymetrix.genometry.comparator)(version>=9.1.0)(!(version>=10.0.0))) [caused by: Unable to resolve genometry [30](R 30.0): missing requirement [genometry [30](R 30.0)] osgi.wiring.package; (osgi.wiring.package=com.apple.laf)] Unresolved requirements: [[org.lorainelab.igb.bai [5](R 5.0)] osgi.wiring.package; (&(osgi.wiring.package=com.affymetrix.genometry.comparator)(version>=9.1.0)(!(version>=10.0.0)))]
org.osgi.framework.BundleException: Unable to resolve org.lorainelab.igb.bai [5](R 5.0): missing requirement [org.lorainelab.igb.bai [5](R 5.0)] osgi.wiring.package; (&(osgi.wiring.package=com.affymetrix.genometry.comparator)(version>=9.1.0)(!(version>=10.0.0))) [caused by: Unable to resolve genometry [30](R 30.0): missing requirement [genometry [30](R 30.0)] osgi.wiring.package; (osgi.wiring.package=com.apple.laf)] Unresolved requirements: [[org.lorainelab.igb.bai [5](R 5.0)] osgi.wiring.package; (&(osgi.wiring.package=com.affymetrix.genometry.comparator)(version>=9.1.0)(!(version>=10.0.0)))]
        at org.apache.felix.framework.Felix.resolveBundleRevision(Felix.java:4398)
        at org.apache.felix.framework.Felix.startBundle(Felix.java:2308)
        at org.apache.felix.framework.BundleImpl.start(BundleImpl.java:1006)
        at org.apache.felix.framework.BundleImpl.start(BundleImpl.java:992)
        at com.affymetrix.main.OSGiHandler.loadBundles(OSGiHandler.java:83)
        at com.affymetrix.main.OSGiHandler.startOSGi(OSGiHandler.java:63)
        at com.affymetrix.main.Main.main(Main.java:30)

          Task: Determine why this error is appearing, if it can be fixed then update this ticket as needed.

            Attachments

              Issue Links

              relates to

              Task - A task that needs to be done. IGBF-3275 Investigate the OSGI wiring issue

              • Major - Major loss of function.
              • Closed

              Task - A task that needs to be done. IGBF-3331 Investigate com.sun.java.swing.plaf.windows requirement

              • Major - Major loss of function.
              • Closed

                Activity

                Ascending order - Click to sort in descending order
                karthik Karthik Raveendran created issue -
                karthik Karthik Raveendran made changes -
                Field Original Value New Value
                Epic Link IGBF-3142 [ 21688 ]
                karthik Karthik Raveendran made changes -
                Sprint Spring 7 2023 Apr 10 [ 167 ]
                karthik Karthik Raveendran made changes -
                Status To-Do [ 10305 ] In Progress [ 3 ]
                nfreese Nowlan Freese made changes -
                Link This issue relates to IGBF-3275 [ IGBF-3275 ]
                nfreese Nowlan Freese made changes -
                Link This issue relates to IGBF-3275 [ IGBF-3275 ]
                nfreese Nowlan Freese made changes -
                Link This issue relates to IGBF-3275 [ IGBF-3275 ]
                nfreese Nowlan Freese made changes -
                Description After updating the libraries and running IGB, some of the many errors that appear at runtime is an osgi wiring package error attributed to com.apple.laf as ahoen below.

                [main] ERROR com.affymetrix.main.OSGiHandler - Unable to resolve org.lorainelab.igb.bai [5](R 5.0): missing requirement [org.lorainelab.igb.bai [5](R 5.0)] osgi.wiring.package; (&(osgi.wiring.package=com.affymetrix.genometry.comparator)(version>=9.1.0)(!(version>=10.0.0))) [caused by: Unable to resolve genometry [30](R 30.0): missing requirement [genometry [30](R 30.0)] osgi.wiring.package; (osgi.wiring.package=com.apple.laf)] Unresolved requirements: [[org.lorainelab.igb.bai [5](R 5.0)] osgi.wiring.package; (&(osgi.wiring.package=com.affymetrix.genometry.comparator)(version>=9.1.0)(!(version>=10.0.0)))]
                org.osgi.framework.BundleException: Unable to resolve org.lorainelab.igb.bai [5](R 5.0): missing requirement [org.lorainelab.igb.bai [5](R 5.0)] osgi.wiring.package; (&(osgi.wiring.package=com.affymetrix.genometry.comparator)(version>=9.1.0)(!(version>=10.0.0))) [caused by: Unable to resolve genometry [30](R 30.0): missing requirement [genometry [30](R 30.0)] osgi.wiring.package; (osgi.wiring.package=com.apple.laf)] Unresolved requirements: [[org.lorainelab.igb.bai [5](R 5.0)] osgi.wiring.package; (&(osgi.wiring.package=com.affymetrix.genometry.comparator)(version>=9.1.0)(!(version>=10.0.0)))]
                        at org.apache.felix.framework.Felix.resolveBundleRevision(Felix.java:4398)
                        at org.apache.felix.framework.Felix.startBundle(Felix.java:2308)
                        at org.apache.felix.framework.BundleImpl.start(BundleImpl.java:1006)
                        at org.apache.felix.framework.BundleImpl.start(BundleImpl.java:992)
                        at com.affymetrix.main.OSGiHandler.loadBundles(OSGiHandler.java:83)
                        at com.affymetrix.main.OSGiHandler.startOSGi(OSGiHandler.java:63)
                        at com.affymetrix.main.Main.main(Main.java:30)
                		After updating the libraries and running IGB, some of the many errors that appear at runtime is an osgi wiring package error attributed to com.apple.laf as shown below.

                {code}
                [main] ERROR com.affymetrix.main.OSGiHandler - Unable to resolve org.lorainelab.igb.bai [5](R 5.0): missing requirement [org.lorainelab.igb.bai [5](R 5.0)] osgi.wiring.package; (&(osgi.wiring.package=com.affymetrix.genometry.comparator)(version>=9.1.0)(!(version>=10.0.0))) [caused by: Unable to resolve genometry [30](R 30.0): missing requirement [genometry [30](R 30.0)] osgi.wiring.package; (osgi.wiring.package=com.apple.laf)] Unresolved requirements: [[org.lorainelab.igb.bai [5](R 5.0)] osgi.wiring.package; (&(osgi.wiring.package=com.affymetrix.genometry.comparator)(version>=9.1.0)(!(version>=10.0.0)))]
                org.osgi.framework.BundleException: Unable to resolve org.lorainelab.igb.bai [5](R 5.0): missing requirement [org.lorainelab.igb.bai [5](R 5.0)] osgi.wiring.package; (&(osgi.wiring.package=com.affymetrix.genometry.comparator)(version>=9.1.0)(!(version>=10.0.0))) [caused by: Unable to resolve genometry [30](R 30.0): missing requirement [genometry [30](R 30.0)] osgi.wiring.package; (osgi.wiring.package=com.apple.laf)] Unresolved requirements: [[org.lorainelab.igb.bai [5](R 5.0)] osgi.wiring.package; (&(osgi.wiring.package=com.affymetrix.genometry.comparator)(version>=9.1.0)(!(version>=10.0.0)))]
                        at org.apache.felix.framework.Felix.resolveBundleRevision(Felix.java:4398)
                        at org.apache.felix.framework.Felix.startBundle(Felix.java:2308)
                        at org.apache.felix.framework.BundleImpl.start(BundleImpl.java:1006)
                        at org.apache.felix.framework.BundleImpl.start(BundleImpl.java:992)
                        at com.affymetrix.main.OSGiHandler.loadBundles(OSGiHandler.java:83)
                        at com.affymetrix.main.OSGiHandler.startOSGi(OSGiHandler.java:63)
                        at com.affymetrix.main.Main.main(Main.java:30)
                {code}

                Task: Determine why this error is appearing, if it can be fixed then update this ticket as needed.
                ann.loraine Ann Loraine made changes -
                Assignee Karthik Raveendran [ karthik ]
                nfreese Nowlan Freese made changes -
                Status In Progress [ 3 ] To-Do [ 10305 ]
                nfreese Nowlan Freese made changes -
                Sprint Spring 7 2023 Apr 10 [ 167 ] Spring 8 2023 Apr 24 [ 168 ]
                nfreese Nowlan Freese made changes -
                Sprint Spring 8 2023 Apr 24 [ 168 ] Spring 9 2023 May 8 [ 169 ]
                nfreese Nowlan Freese made changes -
                Rank Ranked lower
                nfreese Nowlan Freese made changes -
                Sprint Spring 9 2023 May 8 [ 169 ]
                nfreese Nowlan Freese made changes -
                Rank Ranked higher
                nfreese Nowlan Freese made changes -
                Sprint Spring 9 2023 May 8 [ 169 ]
                nfreese Nowlan Freese made changes -
                Rank Ranked lower
                nfreese Nowlan Freese made changes -
                Status To-Do [ 10305 ] In Progress [ 3 ]
                nfreese Nowlan Freese made changes -
                Assignee Nowlan Freese [ nfreese ]
                nfreese Nowlan Freese made changes -
                Link This issue relates to IGBF-3331 [ IGBF-3331 ]
                nfreese Nowlan Freese made changes -
                Status In Progress [ 3 ] To-Do [ 10305 ]
                nfreese Nowlan Freese made changes -
                Assignee Nowlan Freese [ nfreese ]
                nfreese Nowlan Freese made changes -
                Status To-Do [ 10305 ] In Progress [ 3 ]
                nfreese Nowlan Freese made changes -
                Assignee Nowlan Freese [ nfreese ]
                nfreese Nowlan Freese made changes -
                Status In Progress [ 3 ] To-Do [ 10305 ]
                nfreese Nowlan Freese made changes -
                Status To-Do [ 10305 ] In Progress [ 3 ]
                nfreese Nowlan Freese made changes -
                Status In Progress [ 3 ] To-Do [ 10305 ]
                nfreese Nowlan Freese made changes -
                Status To-Do [ 10305 ] In Progress [ 3 ]
                nfreese Nowlan Freese made changes -
                Status In Progress [ 3 ] Needs 1st Level Review [ 10005 ]
                nfreese Nowlan Freese made changes -
                Status Needs 1st Level Review [ 10005 ] First Level Review in Progress [ 10301 ]
                nfreese Nowlan Freese made changes -
                Status First Level Review in Progress [ 10301 ] Ready for Pull Request [ 10304 ]
                nfreese Nowlan Freese made changes -
                Status Ready for Pull Request [ 10304 ] Pull Request Submitted [ 10101 ]
                nfreese Nowlan Freese made changes -
                Status Pull Request Submitted [ 10101 ] Reviewing Pull Request [ 10303 ]
                nfreese Nowlan Freese made changes -
                Status Reviewing Pull Request [ 10303 ] Merged Needs Testing [ 10002 ]
                nfreese Nowlan Freese made changes -
                Status Merged Needs Testing [ 10002 ] Post-merge Testing In Progress [ 10003 ]
                nfreese Nowlan Freese made changes -
                Resolution Done [ 10000 ]
                Status Post-merge Testing In Progress [ 10003 ] Closed [ 6 ]

                  People

                  • Assignee:
                    nfreese Nowlan Freese
                    Reporter:
                    karthik Karthik Raveendran
                  • Votes:
                    0 Vote for this issue
                    Watchers:
                    3 Start watching this issue

                    Dates

                    • Created:
                      Updated:
                      Resolved: