Details
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Type:
Task
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Status: Closed (View Workflow)
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Priority:
Major
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Resolution: Done
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Affects Version/s: None
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Fix Version/s: None
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Labels:None
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Story Points:2
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Epic Link:
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Sprint:Spring 9 2023 May 1
Description
After updating the libraries and running IGB, some of the many errors that appear at runtime is an osgi wiring package error attributed to com.apple.laf as shown below.
[main] ERROR com.affymetrix.main.OSGiHandler - Unable to resolve org.lorainelab.igb.bai [5](R 5.0): missing requirement [org.lorainelab.igb.bai [5](R 5.0)] osgi.wiring.package; (&(osgi.wiring.package=com.affymetrix.genometry.comparator)(version>=9.1.0)(!(version>=10.0.0))) [caused by: Unable to resolve genometry [30](R 30.0): missing requirement [genometry [30](R 30.0)] osgi.wiring.package; (osgi.wiring.package=com.apple.laf)] Unresolved requirements: [[org.lorainelab.igb.bai [5](R 5.0)] osgi.wiring.package; (&(osgi.wiring.package=com.affymetrix.genometry.comparator)(version>=9.1.0)(!(version>=10.0.0)))] org.osgi.framework.BundleException: Unable to resolve org.lorainelab.igb.bai [5](R 5.0): missing requirement [org.lorainelab.igb.bai [5](R 5.0)] osgi.wiring.package; (&(osgi.wiring.package=com.affymetrix.genometry.comparator)(version>=9.1.0)(!(version>=10.0.0))) [caused by: Unable to resolve genometry [30](R 30.0): missing requirement [genometry [30](R 30.0)] osgi.wiring.package; (osgi.wiring.package=com.apple.laf)] Unresolved requirements: [[org.lorainelab.igb.bai [5](R 5.0)] osgi.wiring.package; (&(osgi.wiring.package=com.affymetrix.genometry.comparator)(version>=9.1.0)(!(version>=10.0.0)))] at org.apache.felix.framework.Felix.resolveBundleRevision(Felix.java:4398) at org.apache.felix.framework.Felix.startBundle(Felix.java:2308) at org.apache.felix.framework.BundleImpl.start(BundleImpl.java:1006) at org.apache.felix.framework.BundleImpl.start(BundleImpl.java:992) at com.affymetrix.main.OSGiHandler.loadBundles(OSGiHandler.java:83) at com.affymetrix.main.OSGiHandler.startOSGi(OSGiHandler.java:63) at com.affymetrix.main.Main.main(Main.java:30)
Task: Determine why this error is appearing, if it can be fixed then update this ticket as needed.